AD	Alzheimer’s disease
ATP6V0C	V-type proton ATPase 16 kDa proteolipid subunit
Bcl-xL	B-cell lymphoma extra large
BIK	Bcl-2-interacting killer
BNip1	Bcl2/adenovirus E1B 19-kDa interacting protein 1
BNIP3L	cl-2/adenovirus E1B 19 kDa protein-interacting protein 3-like
CD	Crohn’s disease
CKD	chronic kidney disease
CRC	colorectal cancer
DR5	Death receptor 5
DSS	dextran sulfate sodium
DUB	deubiquitinase
E1	ubiquitin-activating enzyme
E2	ubiquitin-conjugating enzyme
E3	ubiquitin ligase
EC	endometrial carcinoma
ER	endoplasmic reticulum
EWSR1-FLI1	Ewing sarcoma breakpoint region 1-Friend Leukemia Integration 1
FATE1	fetal and adult testis-expressed 1
GAP	GTPase-activating protein
GATOR	GAP activity toward RAGs
GCL	ganglion cell layer
GWAS	genome-wide association study
hpf	hours post-fertilization
IBD	inflammatory bowel disease
IκB	Inhibitor of NF-κB
INL	inner nuclear layer
IRE1α	Inositol requiring 1α
IRS1	insulin receptor substrate 1
JNK	c-Jun N-terminal kinase
MeCP2	methyl-CpG-binding protein 2
MHB	midbrain–hindbrain boundary
mIMCD	mouse inner medullary collecting duct
MIRI	myocardial ischemia–reperfusion injury
mTORC1	mammalian target of rapamycin complex 1
NFAT5	Nuclear factor of activated T cells 5
NF-κB	nuclear factor-kappa B
NT2	Ntera2
ONL	outer nuclear layer
Shh	Sonic hedgehog
TLR	Toll-like receptor
TNBS	trinitrobenzene sulfonic acid
TNF-α	Tumor necrosis factor-α
UC	ulcerative colitis
UPR	unfolded protein response
Ub	Ubiquitin