Table 2.
Details of genome sequencing and its assembly. The contigs (from de novo assembler SPAdes) having very low read support (<40) were dropped before generation of these statistics.
| Strain no. |
Paired-end reads (in millions) |
Sequence data (in Gigabases) |
Length of assembly (in Mega bases) |
GC composition (in %) |
No. of contigs |
N50 (in Kb) |
L50 (in Kb) |
|---|---|---|---|---|---|---|---|
| CAI-17 | 17.6 | 4.4 | 7.0 | 73 | 188 | 108 | 23 |
| CAI-21 | 22.6 | 5.7 | 7.0 | 73 | 331 | 66 | 30 |
| CAI-24 | 24.6 | 6.1 | 7.7 | 72 | 187 | 118 | 20 |
| CAI-68 | 28.0 | 7.0 | 8.2 | 72 | 74 | 279 | 10 |
| CAI-78 | 27.8 | 6.9 | 7.2 | 73 | 448 | 45 | 47 |
| CAI-85 | 30.0 | 7.5 | 8.3 | 72 | 281 | 148 | 15 |
| CAI-93 | 18.3 | 4.6 | 6.8 | 73 | 97 | 196 | 12 |
| CAI-121 | 27.4 | 6.9 | 8.2 | 72 | 77 | 277 | 10 |
| CAI-127 | 29.4 | 7.4 | 8.2 | 72 | 259 | 108 | 24 |
| CAI-140 | 28.6 | 7.2 | 7.5 | 72 | 335 | 77 | 26 |
| CAI-155 | 22.0 | 5.5 | 7.6 | 72 | 56 | 374 | 8 |
| KAI-26 | 28.5 | 7.1 | 7.7 | 72 | 53 | 367 | 7 |
| KAI-27 | 27.1 | 6.8 | 7.2 | 73 | 659 | 37 | 54 |
| KAI-90 | 32.0 | 8.0 | 8.2 | 73 | 87 | 366 | 10 |
| KAI-180 | 30.0 | 7.5 | 6.8 | 73 | 94 | 182 | 11 |
| MMA-32 | 30.1 | 7.5 | 7.7 | 72 | 46 | 401 | 7 |