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. 2020 Jun 18;11:1283. doi: 10.3389/fmicb.2020.01283

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Copyright © 2020 Salgado-Camargo, Castro-Jaimes, Gutierrez-Rios, Lozano, Altamirano-Pacheco, Silva-Sanchez, Pérez-Oseguera, Volkow, Castillo-Ramírez and Cevallos.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Cicular map of members of plasmid lineage LN_1 and linear map of members of LN_2. Plasmid sequences of each lineage were compared with its reference with BLASTn and mapped using GenVision a component of DNASTAR’s Lasergene Core Suite. The genes core are in bold letters. The representative plasmid of LN_1 is plasmid AB34299 (blue ring) and numbers around this plasmid indicate the position of the following genes: 1. Nuclease; 2. Hypothetical protein; 3. Hypothetical protein; 4. Hypothetical protein; 5. Hypothetical protein; 6. Hypothetical protein; 7. Zeta-antitoxin; 8. Zeta-Toxin; 9. Hypothetical protein; 10. Plasmid replicase; 11. Hypothetical protein; 12. Hypothetical protein; 13. Hypothetical protein; 14. DNA polymerase; 15. Hypothetical protein; 16. ISAba1; 17. ISAba1; 18. Transglycosylase; 19. Conjugal protein TraG; 20. Conjugal protein TraH; 21. Hypothetical protein; 22. Conjugal protein TraF; 23. Conjugal protein TraN; 24. Conjugal protein TrbC; 25. Conjugal protein TraU; 26. Conjugal protein TraW; 27. Peptidase; 28. Hypothetical protein; 29. Conjugal protein TraC; 30. Conjugal protein Tra; 31. Hypothetical protein; 32. Protein-disulfide isomerase; 33. Conjugal protein TraB; 34. Conjugal protein TraK; 35. Conjugal protein TraE; 36. Conjugal protein TraL; 37. Hypothetical protein; 38. Hypothetical protein; 39. Murein transglycosylase; 40. Hypothetical protein; 41. Hypothetical protein; 42. Resolvase; 43. Hypothetical protein; 44. Hypothetical protein; 45. ISAba125; 46. Aminoglycoside phosphotransferase; 47. ISAba125; 48. Hypothetical protein; 49. Hypothetical protein; 50. Hypothetical protein; 51. Hypothetical protein; 52. Hypothetical protein; 53. Hypothetical protein; 54. Relaxase MOBF; 55. Type IV secretion system protein VirD4; 56. Hypothetical protein; 57. Hypothetical protein; 58. Hypothetical protein; 59. Hypothetical protein; 60. Hypothetical protein; 61. Molecular chaperone DnaJ; 62. Hypothetical protein; 63. Hypothetical protein; 64. Hypothetical protein; 65. Hypothetical protein; 66. Hypothetical protein; 67. Hypothetical protein; 68. Addiction module toxin; 69. DNA-binding protein; 70. Hypothetical protein; 71. Hypothetical protein; 72. Hypothetical protein; 73. Hypothetical protein; 74. Hypothetical protein; 75. Hypothetical protein; 76. Hypothetical protein; 77. Hypothetical protein; 78. Toxic anion resistance protein TelA; 79. Hypothetical protein; 80. Hypothetical protein; 81. Hypothetical protein; 82. ParB family partition protein; 83. ParA family protein; 84. Hypothetical protein; 85. Hypothetical protein; 86. Hypothetical protein; 87. Hypothetical protein; 88. Hypothetical protein; 89. Hypothetical protein; 90. Hypothetical; protein; 91. Hypothetical protein; 92. Hypothetical protein; 93. Hypothetical protein; 94. DNA-binding protein; 95. Nuclease; 96. Hypothetical protein; 97. Hypothetical protein; 98. Hypothetical protein; 99. Hypothetical protein; 100. Hypothetical protein; 101. Hypothetical protein; 102. Zeta-antitoxin; 103. Zeta-toxin; 104. Hypothetical protein; 105. Hypothetical protein; 106. Hypothetical protein; 107. Hypothetical protein; 108. Hypothetical protein; 109. DNA polymerase; 110. Hypothetical protein; 111. Transposase; 112. Transposase. Purple rings: Purple rings: from outside to inside: pNaval18-74, p2ABTCDC0715, pAC30c, pAba10042b,pAba9102a, pAba7847b, pACICU2, ABKp1, p1ABST2, pNaval81-67, pOIFC143-70, pIS123-67, pABUH1-74, p1AB5075, pAB04-2, plasmid YU-R612, pAba3207b, pCMCVTAb2-Ab4, plasmid CMC-CR-MDR-Ab66, plasmid KAB01, plasmid KAB02, plasmidKAB03, plasmid KAB04, plasmid KAB05, plasmid KAB06, pSSA12_1, pSSMA17_1,pJBA13_1, p15A34_1, pUSA2_1, pUSA15_1, pA85-3, pCS01A, pCS01B, pCR17A,pCR17B, pAba7835b, plasmid KAB07, plasmid KAB08, p15A5_1. Additional orphan plasmid is in red ring: pAC29b. LN_2. The representative plasmid of lineage LN_2 is pPKAB07 (blue bar). Numbers along this bar indicate the position of genes: 1. RepB family plasmid replication initiator protein; 2. DNA-binding protein; 3. Hypothetical protein; 4. Toxin-Antitoxin system spITA (COG3514); 5 Toxin-Antitoxin system spITA (DUF497); 6. TonB dependent receptor; 7. Hypothetical protein; 8. Hypothetical protein; 9. Hypothetical protein; 10. Hypothetical protein. Purple bars: from top to bottom: p1ABTCDC0715, pAC12, pAC30a, p2ABAYE, pAB0057, p1BJAB0868, pCanadaBC5-8.7, pABUH6a-8.8, pMRSN7339-8.7, pMRSN58-8.7, pAB0057, plasmid_2 AB34299, p2AB5075, pAC29a, pA1-1, p15A5_2, pSSA12_2, pA85-2, pAB5075. Additional orphan plasmids are in red bars: from top to bottom: pAB2, p1ABST78, pORAB01-3, p MEX11594, pYU-R612.