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. Author manuscript; available in PMC: 2021 Apr 8.
Published in final edited form as: Cell Host Microbe. 2020 Mar 5;27(4):556–570.e6. doi: 10.1016/j.chom.2020.02.004

Key Resources Table

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Anti-GSDMD-N antibody Cell Signaling Technology 36425; RRID: AB_2799099
Anti-GSDMD antibody Cell Signaling Technology 96458; RRID: N/A
Anti-TMEM173 antibody Cell Signaling Technology 13647; AB_2732796
Anti-phospho-TMEM173 antibody Cell Signaling Technology 19781; RRID: AB_2737062
Anti-ITPR1 antibody Abcam ab5804; RRID: AB_305124
Anti-ACTB antibody Cell Signaling Technology 3700; RRID: AB_2242334
Anti-γ-H2AX antibody Cell Signaling Technology 9718; RRID: AB_2118009
Anti-cleaved CASP1 antibody Cell Signaling Technology 4199; RRID: AB_1903916
Anti-CASP1 antibody Cell Signaling Technology 2225; RRID: AB_2243894
Anti-CASP11 antibody Cell Signaling Technology 14340; RRID: AB_2728693
Anti-cleaved CASP8 antibody Cell Signaling Technology 9496; RRID: AB_561381
Anti-CASP8 antibody Cell Signaling Technology 9746; RRID: AB_2275120
Anti-F3 antibody (monoclonal rat IgG2c; clone #355220) R&D systems MAB3178; RRID: N/A
Anti-rat IgG2c antibody (clone MRG2c-67) BioLegend 407602 RRID: AB_345342
HRP-linked anti-mouse IgG secondary antibody Cell Signaling Technology 7076; RRID: AB_330924
HRP-linked anti-rabbit IgG secondary antibody Cell Signaling Technology 7074; RRID: AB_2099233
Chemicals, Peptides, and Recombinant Proteins
TUDCA Sigma-Aldrich 580549
2-APB Sigma-Aldrich 100065
4PBA Santa Cruz Biotechnology 1821-12-1
Primaxin Merck 0006-3514-58
U73122 Sigma-Aldrich 662035
BAPTA-AM Sigma-Aldrich 196419
Z-IETD-FMK Selleck Chemicals S7314
Thapsigargin Sigma-Aldrich T9033
Tunicamycin Sigma-Aldrich T7765
Cell lysis buffer (10X) Cell Signaling Technology 9803
SDS sample buffer (2X) Thermo Fisher Scientific LC2676
SuperSignal West Pico Chemiluminescent Substrate Thermo Fisher Scientific 34580
SuperSignal West Femto Maximum Sensitivity Substrate Thermo Fisher Scientific 34095
RIPA buffer Cell Signaling Technology 9806
Phosphatase inhibitor cocktail Sigma-Aldrich P0044
Protease inhibitor cocktail Promega G6521
Nutrient agar Becton Dickinson 213000
Brain heart infusion agar Becton Dickinson 211065
Dulbecco’s Modified Eagle’s Medium Thermo Fisher Scientific 11995073
RPMI 1640 Thermo Fisher Scientific 11875119
Fetal bovine serum Millipore TMS-013-B
1% penicillin and streptomycin Thermo Fisher Scientific 15070-063
SsoFast EvaGreen Supermix Bio-Rad 172-5204
TBST Cell Signaling Technology 9997
5% nonfat dry milk Cell Signaling Technology 9999
Protein A agarose beads Cell Signaling Technology 9863
Critical Commercial Assays
Human IFNβ ELISA kit R&D systems DIFNB0
Mouse IFNβ ELISA kit R&D systems 42400-1
Human F3 ELISA kit R&D systems DCF300
Mouse F3 ELISA kit Abcam ab214091
Human fibrin ELISA kit MyBioSource MBS265263
Mouse fibrin ELISA kit MyBioSource MBS706338
Human D-dimer ELISA kit Abcam ab196269
Mouse D-dimer ELISA kit MyBioSource MBS723281
Human TNF ELISA kit R&D Systems DTA00D
Human IL1A ELISA kit R&D Systems DLA50
Human IL1B ELISA kit R&D Systems DLB50
Human IL6 ELISA kit R&D Systems D6050
Human HMGB1 ELISA kit IBL International ST51011
iScript cDNA Synthesis Kit Bio-Rad 1708890
BCA assay kit Cell Signaling Technology 7780
Rneasy Plus Kit QIAGEN 74134
Fura-2 Calcium Flux Assay Kit Abcam ab176766
EasySep Mouse Monocyte Isolation Kit STEMCELL Technologies 19861
Experimental Models: Cell Lines
THP1 ATCC TIB-202
HPBM STEMCELL Technologies 70042
Tmem173−/− THP1 InvivoGen thpd-kostg
Tbk1−/− THP1 InvivoGen thpd-kotbk
Irf3−/− THP1 InvivoGen thpd-koirf3
TMEM173-V155M THP1 InvivoGen thpd-m155
TMEM173-N154S THP1 InvivoGen thpd-s154
Experimental Models: Organisms/Strains
Tmem173−/− mice The Jackson Laboratory 025805
Tmem173flox/flox mice The Jackson Laboratory 031670
Lyz2-Cre mice The Jackson Laboratory 004781
Lck-Cre mice The Jackson Laboratory 003802
GsdmdI105N/I105N mice Dr. Vishva M. Dixit N/A
cGAS−/− mice The Jackson Laboratory 026554
Irf3−/− RIKEN BioResource Research Center RBRC00858
Ifnar1−/− The Jackson Laboratory 028288
C57BL/6 wild-type mice The Jackson Laboratory 000664
E. coli (Serovar O1:K1:H7) ATCC 11775
S. pneumoniae (CIP 104225) ATCC 6303
Oligonucleotides
Mouse Zdhhc1 siRNA Dharmacon L-056132-01-0005
Mouse Stim1 siRNA Dharmacon L-062376-00-0005
Mouse Atp2a1 siRNA Dharmacon L-064501-00-0005
Mouse Atp2a2 siRNA Dharmacon L-040968-00-0005
Mouse Atp2a3 siRNA Dharmacon L-041023-00-0005
Human Zdhhc1 siRNA Dharmacon L-014193-01-0005
Human Stim1 siRNA Dharmacon L-011785-00-0005
Human Atp2a1 siRNA Dharmacon L-006113-00-0005
Human Atp2a2 siRNA Dharmacon L-004082-00-0005
Human Atp2a3 siRNA Dharmacon L-006114-00-0005
Human Tmem173 siRNA Dharmacon L-024333-00-0005
Human Tbk1 siRNA Dharmacon L-003788-00-0005
Human Irf3 siRNA Dharmacon L-006875-00-0005
See Table S2 for primers used for qPCR This paper Table S2
Gsdmd-N cDNA Dr. Feng Shao Shi et al., 2015
Gsdmd-C cDNA Dr. Feng Shao Shi et al., 2015
Gsdmd-D275A Dr. Feng Shao Shi et al., 2015
Atp2a2 cDNA OriGene RC207626
Software and Algorithms
Image Lab software Bio-Rad http://www.bio-rad.com/en-us/product/image-lab-software?ID=KRE6P5E8Z
CFX Manager software Bio-Rad http://www.bio-rad.com/en-us/sku/1845000-cfx-manager-software?ID=1845000
Prism 8 GraphPad https://www.graphpad.com/scientific-software/prism/