Table 1.
Scale | Reference | Type of model | Cell types included | |||||
---|---|---|---|---|---|---|---|---|
T cells | NK cells | B cells | Macrophages | DCs | Tumor cells | |||
Single cell | Arulraj et al. (2018) | ODEs | Effector T cells | |||||
Mesecke et al. (2014) | ODEs | • | ||||||
Ziegler et al. (2019) | ODEs | • | ||||||
Sung et al. (2014) | ODEs | • | ||||||
Multicellular | Hoffmann et al. (2018) | ODEs | • | • | ||||
Robertson‐Tessi et al. (2012) | ODEs | CTLs, Th, Treg | • | • | ||||
Robertson‐Tessi et al. (2015) | ODEs | CTLs, Th, Treg | • | • | ||||
Arabameri et al. (2019) | ODEs | CTLs, Th, Treg | • | • | ||||
Li et al. (2015) | ODEs | CTLs | • | • | • | |||
Mahasa et al. (2016) | ODEs | CTLs | • | • | ||||
Spatial | Liao et al. (2014a) | PDEs | CTLs | • | ||||
Liao et al. (2014b) | PDEs | CTLs | • | |||||
Gong et al. (2017) | ABM | CTLs | • | |||||
Kather et al. (2017) | ABM | CTLs | • | |||||
Mahlbacher et al. (2018) | PDEs | • | • | |||||
El‐Kenawi et al. (2019) | ABM, PDEs | • | • | |||||
Intracellular signaling‐cellular response | Prokopiou et al. (2014) | ABM, PDEs | Naïve T cells | • | ||||
Gao et al. (2016) | ABM, PDEs | Naïve T cells | • | |||||
Girel et al. (2019) | ABM, PDEs | Naïve T cells | • | |||||
Multiple tissues | Kim et al. (2018) | ODEs | CTLs | • | • | |||
Systems pharmacology | Milberg et al. (2019) | ODEs | Naïve, Primed, Treg, Effector | • |