Table 1.
Putative functions of LGS cluster‐proximal genes in Epichloë, Zymoseptoria and Ramularia spp.
| Gene | Gene model(s) 1 | Putative function |
|---|---|---|
| lgsA | EfM3.056230, ZT1E4_G1886, TI39_contig403g00012, RCC_03904 | NRPS‐like, A‐T‐C domain structure |
| lgsB | EfM3.062330, ZT1E4_G1887, TI39_contig42g00014 | NADP‐binding oxidoreductase |
| lgsC | EfM3.062310 | Glycosyl transferase type 2 |
| lgsD | EfM3.056220 | ABC transporter type I |
| 1 | EfM3.056240 | Haloacid dehydrogenase‐like hydrolase |
| 2 | EfM3.062340 | Mitochondrial substrate carrier |
| 3 | EfM3.062320 | FAD‐binding oxidoreductase |
| 4 | ZT1E4_G1891, TI39_contig42g00011 | Transcription factor |
| 5 | ZT1E4_G1890, TI39_contig42g00012 | MFS sugar transporter |
| 6 | ZT1E4_G1889, TI39_contig42g00010 | Anhydro‐N‐acetylmuramic acid kinase |
| 7 | ZT1E4_G1888, TI39_contig42g00013 | DNA repair metallo‐beta‐lactamase |
| 8 | ZT1E4_G1885, TI39_contig403g00011 | Integral membrane protein, unknown function |
| 9 | ZT1E4_G1884, TI39_contig403g00010 | Nitrogen permease regulator 3 |
| 10 | ZT1E4_G1883, TI39_contig403g00009 | Mitochondrial substrate carrier |
| 11 | ZT1E4_G1882, TI39_contig403g00008 | Integral membrane protein, collagen binding/endopeptidase activity |
| 12 | RCC_03900 | Ubiquitin‐conjugating enzyme E2 |
| 13 | RCC_03901 | Integral membrane protein, SUR7/Rim9‐like |
| 14 | RCC_03902 | Unknown |
| 15 | RCC_03903 | Histidine phosphatase superfamily |
| 16 | RCC_03905 | Glycoside hydrolase family 47 |
| 17 | RCC_03906 | Sodium/calcium exchanger |
| 18 | RCC_03907 | Amino acid/polyamine transport |
| 19 | RCC_03908 | Unknown |
1
EfM3 gene models for Epichloë festucae are from the UKY genome database (http://www.endophyte.uky.edu). Gene models for Zymoseptoria tritici (ZT1E4), Zymoseptoria brevis (TI39), and R. collo‐cygni (RCC) are from the Ensembl Fungi database (http://fungi.ensembl.org/index.html).