Table 3.
Pathways related to ROS enriched (FDR < 0.05) by trypsin
Pattern | Number | KO ID | Term | p-value* | FDRa |
---|---|---|---|---|---|
Upregulation | 3 | map 00591 | Linoleic acid metabolism | 1.56E-05 | 0.00034 |
3 | map 00195 | Photosynthesis | 0.00017 | 0.0018 | |
2 | map 00053 | Ascorbate and aldarate metabolism | 0.0084 | 0.046 | |
2 | map 00860 | Porphyrin and chlorophyll metabolism | 0.0065 | 0.047 | |
Downregulation | 9 | map 00940 | Phenylpropanoid biosynthesis | 1.29E-10 | 2.06E-09 |
6 | map 04016 | MAPK signaling pathway - plant | 5.52E-06 | 4.41E-05 | |
6 | map 04626 | Plant-pathogen interaction | 1.34E-05 | 7.15E-05 | |
2 | map 00073 | Cutin, suberin and wax biosynthesis | 0.0020 | 0.0080 | |
2 | map 00592 | alpha-Linolenic acid metabolism | 0.010 | 0.033 |
*p-values were calculated using Fisher’s test
aFDR corrections were calculated using the Benjamini-Hochberg procedure