Table 3.
Summary of the QTL in the CSSLs
| Traits | QTL | Blocks | Chr. | LOD | PVE (%) | Additive Effect | Block Interval | Publication | |
|---|---|---|---|---|---|---|---|---|---|
| Start | End | ||||||||
| PH | q-PHD01 | block329 | D01 | 3.33 | 4.78 | 1.02 | 3,186,046 | 4,556,068 | |
| FFBH | q-FFBHA02 | block67 | A02 | 2.81 | 4.04 | 0.34 | 44,641,617 | 45,470,669 | |
| BN | q-BNA05 | block125 | A05 | 3.67 | 4.86 | 0.97 | 31,292,912 | 34,892,387 | |
| q-BNA09 | block224 | A09 | 3.63 | 4.81 | 0.59 | 60,202,506 | 62,601,458 | ||
| q-LPD02 | block352 | D02 | 2.59 | 3.41 | −0.63 | 62,288,058 | 63,106,259 | ||
| BWT | q-BWTA08 | block205 | A08 | 3.04 | 3.97 | −0.35 | 93,642,362 | 102,084,301 | |
| q-BWTD03 | block358 | D03 | 2.81 | 3.65 | − 0.15 | 731,194 | 1,330,783 | ||
| LP | q-LPA01 | block3 | A01 | 6.40 | 6.95 | −1.83 | 2,639,939 | 3,677,553 | |
| q-LPA05 | block122 | A05 | 4.57 | 4.89 | −1.27 | 23,097,331 | 26,299,649 | ||
| q-LPA07 | block171 | A07 | 3.29 | 2.99 | −1.19 | 86,057,988 | 88,357,231 | ||
| q-LPA11 | block278 | A11 | 5.10 | 5.48 | −1.63 | 120,826,316 | 121,562,473 | ||
| q-LPD03 | block371 | D03 | 8.39 | 9.24 | −2.06 | 33,453,595 | 43,516,324 | ||
| q-LPD10 | block536 | D11 | 2.62 | 2.37 | −1.23 | 4,523,812 | 5,385,834 | ||
| SI | q-SIA09 | block222 | A09 | 4.79 | 2.48 | 0.31 | 54,020,891 | 58,352,764 | |
| q-SIA11 | block278 | A11 | 4.02 | 2.06 | 0.28 | 120,826,316 | 121,562,473 | ||
| q-SIA12 | block281 | A12 | 4.31 | 2.21 | 0.33 | 12,595 | 809,856 | ||
| q-SID03 | block373 | D03 | 3.38 | 1.73 | 0.36 | 44,469,168 | 47,084,844 | ||
| q-SID04–1 | block381 | D04 | 17.64 | 10.03 | 1.23 | 2,305,353 | 3,131,469 | ||
| q-SID04–2 | block384 | D04 | 24.46 | 14.67 | −1.05 | 4,507,347 | 6,673,788 | ||
| q-SID07 | block446 | D07 | 4.76 | 2.45 | −0.08 | 5,062,647 | 5,765,634 | ||
| q-SID08 | block471 | D08 | 3.85 | 1.98 | −0.09 | 27,684 | 689,962 | ||
| FL | q-FLA01 | block21 | A01 | 2.53 | 2.89 | 0.48 | 51,165,194 | 53,482,140 | |
| q-FLA02 | block59 | A02 | 8.10 | 9.60 | 0.70 | 2,981,374 | 3,502,835 | ||
| q-FLD01 | block329 | D01 | 3.93 | 4.53 | 0.51 | 3,186,046 | 4,556,068 | ||
| q-FLD06 | block428 | D06 | 2.78 | 3.17 | 0.80 | 8,954,143 | 12,114,917 | ||
| FS | q-FSA01 | block21 | A01 | 2.53 | 2.89 | 0.48 | 51,165,194 | 53,482,140 | |
| q-FSA02 | block59 | A02 | 8.10 | 9.60 | 0.70 | 2,981,374 | 3,502,835 | ||
| q-FSD01 | block329 | D01 | 3.93 | 4.53 | 0.51 | 3,186,046 | 4,556,068 | ||
| q-FSD06 | block428 | D06 | 2.78 | 3.17 | 0.80 | 8,954,143 | 12,114,917 | ||
| MIC | q-MICA02–1 | block59 | A02 | 6.99 | 7.09 | −0.20 | 2,981,374 | 3,502,835 | |
| q-MICA02–2 | block64 | A02 | 3.70 | 3.65 | 0.28 | 14,861,013 | 15,326,651 | ||
| q-MICA07 | block171 | A07 | 2.70 | 2.44 | −0.16 | 86,057,988 | 88,357,231 | ||
| q-MICA09 | block226 | A09 | 6.40 | 6.46 | 0.24 | 63,998,867 | 64,921,374 | ||
| q-MICA10 | block237 | A10 | 2.60 | 2.54 | 0.33 | 1,292,885 | 1,451,802 | ||
| q-MICA11 | block278 | A11 | 3.46 | 3.42 | −0.19 | 120,826,316 | 121,562,473 | ||
| q-MICD03 | block371 | D03 | 3.04 | 2.99 | −0.18 | 33,453,595 | 43,516,324 | ||
| q-MICD08 | block471 | D08 | 4.29 | 4.27 | 0.07 | 27,684 | 689,962 | ||
| q-MICD11 | block580 | D11 | 2.64 | 2.59 | −0.14 | 71,643,126 | 72,910,318 | ||
| FEL | q-FELA03 | block77 | A03 | 4.84 | 6.91 | 0.62 | 1,173,846 | 2,339,035 | |
| q-FELD07 | block446 | D07 | 5.47 | 7.84 | 0.18 | 5,062,647 | 5,765,634 | ||
| q-FELD08 | block471 | D08 | 3.16 | 4.45 | 0.17 | 27,684 | 689,962 | Said et al.2015 | |
| FU | q-FUA07 | block164 | A07 | 3.01 | 5.57 | 0.36 | 8,903,355 | 12,793,020 | |
| q-FUA12 | block282 | A12 | 2.68 | 2.23 | 0.21 | 809,856 | 1,774,576 | ||
| SFC | q-SFCA07 | block164 | A07 | 3.15 | 4.27 | −0.64 | 8,903,355 | 12,793,020 | |
| q-SFCA12 | block282 | A12 | 3.51 | 4.78 | −0.43 | 809,856 | 1,774,576 | ||
| FM | q-FMA02 | block64 | A02 | 3.06 | 3.83 | 0.01 | 14,861,013 | 15,326,651 | |
| q-FMA11 | block276 | A11 | 2.94 | 3.83 | −0.01 | 118,798,683 | 120,093,234 | ||
| q-FMD03 | block373 | D03 | 2.53 | 3.21 | −0.01 | 44,469,168 | 47,084,844 | ||
| q-FMD12 | block593 | D12 | 2.94 | 3.83 | −0.01 | 57,692,428 | 58,105,224 | ||
| SOC | q-SOCA01–1 | block3 | A01 | 21.66 | 5.84 | 2.32 | 2,639,939 | 3,677,553 | |
| q-SOCA01–2 | block4 | A01 | 3.14 | 0.73 | −1.17 | 3,677,553 | 4,874,638 | ||
| q-SOCA01–3 | block12 | A01 | 21.59 | 5.82 | 1.90 | 14,607,137 | 17,693,930 | ||
| q-SOCA01–4 | block13 | A01 | 8.52 | 2.08 | −1.60 | 17,693,930 | 28,547,783 | ||
| q-SOCA03 | block94 | A03 | 4.62 | 1.09 | −1.16 | 96,774,034 | 98,312,105 | ||
| q-SOCA05 | block122 | A05 | 6.73 | 1.62 | 1.00 | 23,097,331 | 26,299,649 | ||
| q-SOCA07 | block171 | A07 | 6.71 | 1.62 | 1.22 | 86,057,988 | 88,357,231 | ||
| q-SOCA11 | block277 | A11 | 6.08 | 1.45 | 1.32 | 120,093,234 | 120,826,316 | ||
| q-SOCA12–1 | block293 | A12 | 28.34 | 8.05 | 3.12 | 82,990,142 | 84,639,641 | ||
| q-SOCA12–2 | block294 | A12 | 17.02 | 4.43 | −2.85 | 84,639,641 | 86,335,298 | Yu et al.2012 | |
| q-SOCD01–1 | block332 | D01 | 34.76 | 10.40 | −4.36 | 17,173,981 | 44,222,294 | ||
| q-SOCD01–2 | block333 | D01 | 44.76 | 14.51 | 4.22 | 44,222,294 | 45,104,476 | Yu et al.2012 | |
| q-SOCD03–1 | block372 | D03 | 8.57 | 2.08 | 1.60 | 43,516,324 | 44,469,168 | ||
| q-SOCD03–2 | block374 | D03 | 4.38 | 1.01 | 1.95 | 47,084,844 | 48,284,786 | ||
| q-SOCD10 | block535 | D10 | 10.08 | 2.49 | 2.14 | 4,155,341 | 4,523,812 | ||