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. 2020 Jun 23;8:e9382. doi: 10.7717/peerj.9382

Box 2. The observation matrix associated with our simulations representing the linkage between true and observed states at time t, and including parameter recapture probability (p).

True state at time t Observed state at time t + 1
Seen alive Recovered dead Not seen or recovered
Alive, inside p 0 1 − p
Alive, outside 0 0 1
Recently dead 0 1 0
Dead 0 0 1