Table 1.
pBlast Alignment Metrics.
| Fusion Loop DomainsAligned | Score | Expect | Method | Identities | Positives |
|---|---|---|---|---|---|
| FL1-CoV-1/CoV-2 | 47.4 bits (111) | 7e-13 | Composition-Based stats | 21/22(95%) | 22/22(100%) |
| FL2-CoV-1/CoV-2 | 47.4 bits (111) | 9e-13 | Composition-Based stats | 19/22(90%) | 20/21(95%) |
| FL2-CoV-2/Rubella | 13.5 bits (23) | 0.99 | Composition-Based stats | 4/7(57%) | 5/7(71%) |
| Fl2-CoV-2/HCoV-229E | 14.2 bits (25) | 0.48 | Composition-Based stats. | 4/6(67%) | 5/6(83%) |
| Fl2-CoV-2/Influenza | No similarity | NA | Composition-Based stats. | NA | NA |