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. 2020 Jun 26;10:10462. doi: 10.1038/s41598-020-67112-4

Figure 1.

Figure 1

Binding mode of studied compounds retrieved from focused molecular docking. (A) HDAC1, (B) HDAC6 and (C) HDAC8. From left panel HDAC is in white ribbon representation, FH27, YSL99, YSL106, YSL112, YSL116, YSL121, YSL125 and YSL129 are depicted as wire, while YSL109 is depicted as cyan ball and stick, in the middle panel a zoom on the YSL109 and residues with which it interacts are depicted, YSL109 is depicted as cyan ball and stick, while interacting residues as green sticks; and finally in the right panel a surface representation of the catalytic tunnel is depicted in gray, YSL109 is depicted in cyan, while FH27 is depicted in yellow ball and stick, Zn is depicted as gray sphere. Figure built with Pymol and UCSF Chimera softwares.