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. 2020 Mar 30;36(12):3803–3810. doi: 10.1093/bioinformatics/btaa216

Table 1.

Summary of the main and epistatic effects results

chr1 position1 chr2 position2 β^ t-Value P-value Literature
II 503 196 −0.0249 2.0147 0.0440
III 128 224 0.0463 2.9652 0.0030 Bloom et al. (2015)
IV 1 471 524 0.0386 3.6806 0.0002 Bloom et al. (2015)
V 212 373 −0.0361 1.9957 0.0460
VII 842 206 −0.0387 2.3022 0.0214 Bloom et al. (2015)
VIII 114 934 0.0827 2.8283 0.0047 Bloom et al. (2015) and Forsberg et al. (2017)
X 92 630 −0.0308 2.0381 0.0416
X 123 590 −0.0411 2.0417 0.0412
X 383 417 0.0250 2.1278 0.0334
X 549 542 −0.0487 2.3339 0.0197 Bloom et al. (2015)
XI 466 269 −0.0262 2.7424 0.0061
XI 532 119 −0.0461 2.0182 0.0436 Bloom et al. (2015)
XI 579 622 0.0273 2.3398 0.0193
XII 141 390 0.0342 2.1336 0.0329 Bloom et al. (2015)
XII 569 539 0.0503 2.1966 0.0281 Bloom et al. (2015)
XIII 23 620 0.0686 2.2181 0.0266 Bloom et al. (2015)
XIII 24 565 0.0956 2.7379 0.0062 Bloom et al. (2015)
XIII 25 025 0.0633 2.0706 0.0385 Bloom et al. (2015)
XIII 25 638 0.0923 2.6961 0.0070
XIII 49 898 −0.0633 2.4692 0.0136 Bloom et al. (2015)
XIII 285 831 −0.0400 4.1116 0.0000 Bloom et al. (2015)
XIII 398 491 −0.0400 2.6333 0.0085 Bloom et al. (2015)
XIII 618 430 −0.0404 2.6718 0.0076
XIII 697 993 −0.0479 1.9661 0.0493
XIII 701 244 −0.0528 2.0161 0.0439 Bloom et al. (2015)
XIII 751 466 0.0723 4.0617 0.0000 Bloom et al. (2015) and Forsberg et al. (2017)
XV 74 338 −0.0321 2.6910 0.0072
XV 309 869 0.0233 2.5929 0.0096 Bloom et al. (2015)
XV 758 119 0.0242 2.0074 0.0448
XV 828 529 0.0392 2.0774 0.0378 Bloom et al. (2015)
XVI 208 747 0.0729 4.5646 0.0000 Bloom et al. (2015)
XI 521 261 II 718 018 0.0299 3.2682 0.0011
VIII 100 079 IV 998 484 0.0619 5.5940 0.0000 Bloom et al. (2015)
VIII 517 419 VII 167 895 −0.0325 3.3301 0.0009

Note: The first four columns list the significant main and epistatic effects. The rows with one SNP denote main effects, while those with two SNPs represent epistatic effects.