Table 2.
Summary of identified SSRs in the Cornus officinalis de novo transcriptome assembly | |
Total number of sequences examined | 304,371 |
Total size of examined sequences (bp) | 225,753,992 |
Total number of identified SSRs | 95,533 |
Number of SSR containing sequences | 70,222 |
Number of sequences containing >1 SSR | 18,601 |
Number of SSRs present in compound formation | 10,953 |
Distribution of different repeat type classes identified in the Cornus officinalis de novo transcriptome assembly | |
Mono-nucleotides | 38,599 |
Di-nucleotides | 45,827 |
Tri-nucleotides | 9,802 |
Tetra-nucleotides | 712 |
Penta-nucleotides | 168 |
Hexa-nucleotides | 425 |