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. 2020 Jun 29;15(6):e0235215. doi: 10.1371/journal.pone.0235215

Table 4. Gene models found in delimitated region CDRK resistance loci against anthracnose and angular leaf spot were fine-mapped, gene position in reference genome v1.0 and annotation.

Gene Model in P. vulgaris Homolog in A. thaliana E-valuea Identitya Functional annotation on TAIRb Functional annotation on Phytozomec
Phvul.001G245300 AT4G18640 8 × 10−169 43.40% Male Discoverer 2 Protein tyrosine kinase (pkinase_tyr) // leucine rich repeat n-terminal domain (lrrnt_2)
Phvul.001G246000 AT5G05450 0 70.50% RNA Helicase 18 ATP-dependent RNA helicase ddx55/spb4 [ec:3.6.4.13] (ddx55, spb4)
Phvul.001G246100 AT2G37390 1 × 10−105 52.60% Sodium Potassium Root Defective 2 Cation-dependent mannose-6-phosphate receptor
Phvul.001G246200 AT2G40320 0 69.90% Trichome Birefringence-Like 33 Protein trichome birefringence-like 33
Phvul.001G246300 AT2G40330 1 × 10−76 56.90% ABA Receptor PYL6 Abscisic acid receptor pyl5
Phvul.001G246400 AT5G20400 0 48.30% Flavanone 3 Hydroxylase-like SNF2 domain-containing protein classy 1-related
Phvul.001G246800 AT3G50740 0 60.60% UDP-Glucosyl Transferase 72E1 Leucine-rich repeat receptor-like protein kinase imk3-related

aE-values and Identity for BLASTp analysis performed on NCBI (National Center for Biotechnology Information; https://www.ncbi.nlm.nih.gov)

b Functional gene annotation resource: TAIR—The Arabidopsis Information Resource (https://www.arabidopsis.org)

cFunctional gene annotation resource: Phytozome—Common bean reference genome v1.0 (https://phytozome.jgi.doe.gov#