Table 2.
Quantitative assessment of large-scale genomic changes
| Gain | Loss | DNA size | UPD | SGA | NCBI GEO | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Regions | (Mb) | (%) | Regions | (Mb) | (%) | (Mb) | (%) | Regions | (Mb) | (%) | Regions | (Mb) | (%) | Accession | ||
| Kasumi-3 | AML-M0 | 2 | 70.9 | 1.2 | 10 | 165.6 | 2.8 | − 94.7 | − 1.6 | 12 | 238.1 | 4.0 | 24 | 474.6 | 7.9 | GSM4254131 |
| Kasumi-1 | AML-M2 | 11 | 348.5 | 5.8 | 11 | 262.9 | 4.4 | 85.6 | + 1.4 | 1 | 70.0 | 1.2 | 23 | 681.4 | 11.4 | GSM4254129 |
| Kasumi-6 | AML-M2 | 6 | 336.4 | 5.6 | 2 | 56.2 | 0.9 | 280.2 | + 4.7 | 7 | 221.4 | 3.7 | 15 | 614.0 | 10.3 | GSM4254134 |
| Kasumi-4 | CML-BC | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | GSM4254132 |
| Kasumi-5 | T-ALL | 1 | 25.2 | 0.4 | 3 | 84.5 | 1.4 | − 59.3 | − 1.0 | 1 | 48.3 | 0.8 | 5 | 158.0 | 2.6 | GSM4254133 |
| Kasumi-2 | BCP-ALL | 2 | 181.1 | 3.0 | 10 | 197.4 | 3.3 | − 16.3 | − 0.3 | 0 | 0 | 0 | 12 | 378.5 | 6.3 | GSM4254130 |
| Kasumi-7 | BCP-ALL | 1 | 1.2 | 0.0 | 9 | 44.1 | 0.7 | − 42.9 | − 0.7 | 1 | 9.6 | 0.2 | 11 | 54.9 | 0.9 | GSM4254135 |
| Kasumi-8 | BCP-ALL | 0 | 0 | 0 | 5 | 73.6 | 1.2 | − 73.6 | − 1.2 | 0 | 0 | 0 | 5 | 73.6 | 1.2 | GSM4254136 |
| Kasumi-9 | BCP-ALL | 0 | 0 | 0 | 6 | 62.5 | 1.0 | − 62.5 | − 1.0 | 1 | 12.6 | 0.2 | 7 | 75.1 | 1.3 | GSM4254137 |
| Kasumi-10 | BCP-ALL | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 26.2 | 0.4 | 1 | 26.2 | 0.4 | GSM4254138 |
Normal total DNA sizes 5977 Mb for males (46,XY) and 6073 Mb for females(46,XX) based on the hg19 reference genome data