Skip to main content
. 2020 Jun 23;11:1354. doi: 10.3389/fmicb.2020.01354

TABLE 3.

Alpha-diversity indices including the number of observed OTUs, Chao1, Shannon, Simpson, dominance, and equitability indices according to various treatments for 16S rRNA (A) and ITS dataset (B).

A 16S rRNA
Observed otus Chao1 Shannon Simpson Dominance Equitability
GW/S 94884b 113784c 5.0970.152c 0.8280.016d 0.1720.016a 0.5160.009e
GW/NS 507331c 535325d 7.6271.285ab 0.9900.009a 0.0100.009d 0.8750.026a
RW 5262c 63010d 5.0350.165c 0.9000.011c 0.1000.011b 0.5570.019d
BBF 135518b 157633b 6.4980.056bc 0.9460.002b 0.0540.002c 0.6250.006c
ABF 185540a 205937a 8.3410.022a 0.9850.001a 0.0150.001d 0.7690.004b

B ITS
Observed otus Chao1 Shannon Simpson Dominance Equitability

GW/S 1179c 13214c 3.5780.117d 0.8320.027c 0.1670.027b 0.5210.023c
GW/NS 40d 75c 0.305e 0.082d 0.918a 0.057d
RW 3186a 3494a 5.68230.202a 0.9460.011a 0.0540.011d 0.6840.024a
BBF 31721a 36239a 5.1410.127b 0.8940.015b 0.1060.015c 0.6190.014b
A.BF 22310b 27225b 4.6800.082c 0.9170.005ab 0.0830.005cd 0.6000.006b

Water sample codes can be found in Figure 1 legend or Table 1. Mean ± standard deviation of 3 values are reported (except for GW/NS ITS dataset for which there is one value). Different letters indicate significant differences between treatments (ANOVA, Tukey HSD test, p < 0.05).