Fig. 4.

Multi-omics analysis of A549 cells treated with dexamethasone. a Pairwise filled contour plots of ranked profiles shows underlying correlations. b Plot of gene set effect size and significance. c Example gene sets that have large effect sizes. d Example gene sets with small FDR values. For c and d, grey areas denote the distribution of ranks of all detected genes, with median and quartiles depicted by the wide boxplot. Distribution of gene set members is shown by the black violin, with median and interquartile ranges given by the narrow boxplot