Table 1.
Dickeya solani strains subjected to de novo sequencing in the frames of this study in addition to their genomic contents
| Genome nos /strain nos | Strain | Genome | ||||||
|---|---|---|---|---|---|---|---|---|
| Total number of genes | Number of genes encoding | |||||||
| Country, regiona | Host, year of isolation | Literature reference | Proteins | rRNA | tRNA | tmRNAs | ||
| IFB0167 | Poland, Lower Silesian Voivodeship | Potato cv. Fresco, 2009 | [27] | 4308 | 4146 | 22 | 75 | 1 |
| IFB0212 | Poland, Mazovian Voivodeship | Potato, 2010 | [29] | 4304 | 4143 | 18 | 72 | 1 |
| IFB0231 (VIC-BL-25) | Finland, Liminka | Potato cv. Victoria, 2008 | [28] | 4313 | 4151 | 22 | 75 | 1 |
| IFB0311 | Poland, Pomeranian Voivodeship | Potato cv. Innovator, 2011 | [27] | 4306 | 4144 | 20 | 74 | 1 |
| IFB0417 | Portugal, Santarem | Potato cv. Lady Rosetta, 2012 | This study | 4608 | 4446 | 22 | 75 | 1 |
| IFB0421 | Portugal, Santarem | Potato cv. Lady Rosetta 2012 | This study | 4349 | 4187 | 22 | 75 | 1 |
| IFB0487 | Poland, Podkarpackie Voivodeship | Potato cv. Vineta, 2013 | [27] | 4572 | 4409 | 22 | 75 | 1 |
| IFB0695 | Poland, Kuyavian-Pomeranian | Potato cv. Arielle, 2014 | This study | 4337 | 4172 | 22 | 75 | 1 |
aThe geographical locations of the isolated strains: IFB0167 - Wawrzyszow 50°73′12″ N 17°23′58″ E, IFB0212 - Mlochow 52°02′35.76″ N 20°46′4.01″ E, IFB0231 - High Grade seed potato growing region 64°48′35.46″ N 25°24′55.62″ E, IFB0311 - Lebork 54°32′11.181″ N 17°44′56.144″ E, IFB0417 and IFB0421 39°12′0″ N 8°42′0″ W, IFB0487 - Zdziechowice 50°47′00″ N 22°07′00″ E, IFB0695 - Niwy 53°34′39.443″ N 17°25′49.649″ E. For the origin and the annotated genomic features of the herein included Dickeya solani reference strains see our former study Golanowska et al. (2018) [31]