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. 2020 Jun 10;8:574. doi: 10.3389/fbioe.2020.00574

Table 3.

Simulation runtime.

Example Mono culture Syntrophic co-culture Human gut microbiome
Species 1 2 8 773a
ODE solver 1.75 min 7.24 min 31.95 h,
parallel (8 cores): 8.69 h
Not tested
Augmented Euler method 3.67 min 22.29 min 0.63 h,
parallel (8 cores): 0.22 h
15.40 d,
parallel (12 cores): 1.87 d
a

The option to record limiting fluxes was disabled for simulating the 773-species microbiome.