TABLE 1.
Notes | Strain | Country | Year | Assembly accession numbers | References |
Mexican strains, finished | |||||
INNSZ174 | Mexico | 1998 | CP031998 - CP032001 | This study | |
11616 | Mexico | 2012 | CP032002 - CP032008 | This study | |
AN43 | Mexico | 2015 | CP031976 - CP031978 | This study | |
AN54 | Mexico | 2016 | CP041224 - CP041229 | Bello-López et al., 2019 | |
AN59 | Mexico | 2016 | CP031972 - CP031975 | This study | |
2126ch | Mexico | 2011 | CP031991 – CP031997 | This study | |
5227 | Mexico | 2014 | CP031988 – CP031990 | This study | |
AN3 | Mexico | 2010 | CP031984 – CP031987 | This study | |
AN4 | Mexico | 2010 | CP031979 – CP031983 | This study | |
NCBI’s strains, finished | |||||
TJS01 | China | 2012 | NZ_CP018871 – NZ_CP018873 | ||
XH900 | China | 2016 | NZ_CP018260 – NZ_CP018261 | ||
HW-2A | China | 2017 | NZ_CP030880 | ||
sz1652 | China | 2017 | CP032135 – CP032137 | Jiang et al., 2019 | |
Mexican strains, draft | |||||
2227 | Mexico | 2011 | WTTY00000000 | This study | |
3275 | Mexico | 2012 | WTTX00000000 | This study | |
3281 | Mexico | 2012 | WTTW00000000 | This study | |
5439 | Mexico | 2014 | WTTV00000000 | This study | |
10633 | Mexico | 2013 | WTTU00000000 | This study | |
11650 | Mexico | 2013 | WTTT00000000 | This study | |
11652 | Mexico | 2010 | WTTS00000000 | This study | |
11654 | Mexico | 2008 | WTTR00000000 | This study | |
11658 | Mexico | 2008 | WTTQ00000000 | This study | |
978H | Mexico | 2016 | WTTP00000000 | This study | |
AN10 | Mexico | 2012 | WTTO00000000 | This study | |
AN11 | Mexico | 2012 | WTTN00000000 | This study | |
AN13 | Mexico | 2012 | WTTM00000000 | This study | |
AN20 | Mexico | 2013 | WTTL00000000 | This study | |
AN27 | Mexico | 2014 | WTTK00000000 | This study | |
AN34 | Mexico | 2014 | WTTJ00000000 | This study | |
AN44 | Mexico | 2015 | WTTI00000000 | This study | |
AN5 | Mexico | 2011 | WTTH00000000 | This study | |
AN60 | Mexico | 2016 | WTTG00000000 | This study | |
AN61 | Mexico | 2016 | WTTF00000000 | This study | |
AN63 | Mexico | 2016 | WTTE00000000 | This study | |
AN7 | Mexico | 2011 | WTTD00000000 | This study | |
DIV33 | Mexico | 2016 | WTTC00000000 | This study | |
NCBI’s strains, draft | |||||
ATCC 19194 | NZ_GG770435.1 – NZ_GG770495.1 | Baumann et al., 1968 | |||
ATCC 27244 | United States | NZ_GG665949.1 – NZ_GG666013.1 | Marcus et al., 1969 | ||
CIP 64.3 T | NZ_KB849798.1 – NZ_KB849812.1 | Baumann et al., 1968; Touchon et al., 2014 | |||
NIPH 261 | Czechia | 1993 | NZ_KB849813.1 – NZ_KB849819.1 | Nemec et al., 2000; Touchon et al., 2014 | |
KCRI-348C | Tanzania | 2014 | NZ_OVCN01000001.1 – NZ_OVCN01000043.1 | ||
NCTC 10305 | 1962 | NZ_UFRR01000001.1 – NZ_UFRR01000006.1 | |||
NCTC 10306 | 1962 | NZ_UFRT01000001.1 – NZ_UFRT01000004.1 | |||
NCTC 12155 | 1987 | NZ_UAPN01000001.1 – NZ_UAPN01000032.1 |