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. 2020 Jun 8;16(6):e1008633. doi: 10.1371/journal.ppat.1008633

Fig 3. Differentially accessible peaks analysis.

Fig 3

(A) The number of differentially accessible peaks at 8, 24, and 48 h.p.i. (B) Volcano plot of differentially accessible peaks between BmN cells and the 48 h p.i. group. (C) Correlation of chromatin accessibility at all peak and gene expression between BmN cells and the 48 h p.i. group. (D) Boxplot of the expression levels of cell adhesion associated genes and the proportion of floating cells during viral infection. Two-way ANOVA was performed to analyze the significance of gene expression levels between BmN cells, and the 24 and 48 h p.i. groups. Student’s t-test was performed for floating cell data between BmN cells, and 24 and 48 h p.i. samples. (E) Normalized ATAC-seq and RNA-seq profiles at SCB loci. Shaded regions are representative of a decline by 48 h p.i.