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. 2020 Jun 24;11:1358. doi: 10.3389/fmicb.2020.01358

TABLE 2.

Genome annotations for DLP3 obtained from BLASTp and CD-Search data.

CDS Interval Length (AA) Putative function Species Coverage (%) E-Value Identity (%) Accession
1 48–1856 602 Portal protein DLP5a 98 0 83 ATS92275.1
2 1856–3193 445 ParB-like nuclease domain protein DLP5 100 0 75 ATS92281.1
3 3249–3854 201 Serine protease DLP5 98 1.00E-113 80 ATS92325.1
4 3847–4017 56 Hypothetical protein gp_005 DLP5 100 3.00E-24 77 ATS92409.1
5 4090–5307 405 Hypothetical protein gp_006 DLP5 100 0 79 ATS92283.1
6 5340–6272 310 Major capsid protein DLP5 100 0 93 ATS92299.1
7 6358–6624 88 Hypothetical protein gp_008 DLP5 100 3.00E-33 65 ATS92383.1
8 6693–7436 247 Ribonuclease E DLP5 100 3.00E-113 73 ATS92315.1
9 7457–8068 203 Hypothetical protein gp_010 DLP5 100 2.00E-121 82 ATS92324.1
10 8068–8493 141 Tail protein DLP5 99 6.00E-71 77 ATS92347.1
11 8490–8936 148 Hypothetical protein gp_012 DLP5 99 3.00E-82 76 ATS92342.1
12 9012–9305 97 Hypothetical protein gp_013 DLP5 100 5.00E-50 85 ATS92376.1
13 9316–9693 125 Hypothetical protein gp_014 DLP5 100 4.00E-48 67 ATS92360.1
14 9693–10448 251 Hypothetical protein gp_015 DLP5 100 2.00E-152 82 ATS92314.1
15 10465–10959 164 Hypothetical protein gp_016 DLP5 100 9.00E-83 81 ATS92333.1
16 11016–11144 42 Hypothetical protein gp_017 DLP5 95 2.00E-15 83 ATS92415.1
17 11151–14915 1254 Tape measure protein DLP5 99 0 83 ATS92270.1
18 14917–16500 527 Hypothetical protein gp_019 DLP5 100 0 79 ATS92277.1
19 16500–17474 324 Hypothetical protein gp_020 DLP5 100 0 83 ATS92295.1
20 17474–19153 559 Hypothetical protein gp_021 DLP5 100 0 74 ATS92276.1
21 19150–19968 272 Minor tail protein DLP5 100 0 90 ATS92307.1
22 19968–20255 95 Hypothetical protein gp_023 DLP5 100 5.00E-62 98 ATS92377.1
23 20252–20455 67 Hypothetical protein gp_024 DLP5 100 1.00E-38 93 ATS92399.1
24 20445–22925 826 Tail protein DLP5 100 0 86 ATS92271.1
25 22925–23923 332 Tail assembly protein DLP5 100 0 86 ATS92294.1
26 23926–24102 58 Tail assembly protein DLP5 100 3.00E-30 88 ATS92406.1
27 24110–25081 323 Tail assembly protein DLP5 100 2.00E-169 70 ATS92296.1
28 25085–26107 340 Tail protein Salvob 100 3.00E-76 43 AHB12239.1
29 26183–26611 142 Hypothetical protein gp_030 DLP5 100 1.00E-91 93 ATS92345.1
30 26611–27096 161 Hypothetical protein gp_031 DLP5 100 6.00E-87 91 ATS92334.1
31 27096–27653 185 Lysozyme DLP5 100 2.00E-120 89 ATS92330.1
32 27655–28059 134 Hypothetical protein gp_033 DLP5 100 3.00E-80 88 ATS92352.1
33 28110–28280 56 Hypothetical protein gp_034 DLP5 78 1.00E-11 70 ATS92408.1
34 28329–28715 128 DUF2500 containing protein DLP5 100 3.00E-77 89 ATS92350.1
35 28687–28974 95 Hypothetical protein gp_036 DLP5 93 2.00E-57 96 ATS92380.1
36 29077–29271 64 Hypothetical protein
37 29275–29574 99 Hypothetical protein gp_041 DLP5 95 2.00E-58 95 ATS92374.1
38 29634–30791 385 Hypothetical protein gp_042 DLP5 100 0 78 ATS92287.1
39 30898–31506 202 Hypothetical protein gp_043 DLP5 87 2.00E-82 70 ATS92323.1
40 31499–31951 150 Phosphoglycerate kinase DLP5 100 2.00E-103 96 ATS92341.1
41 31951–32136 61 Hypothetical protein gp_046 DLP5 100 2.00E-25 79 ATS92401.1
42 32197–33141 314 Hypothetical protein gp_047 DLP5 100 3.00E-138 85 ATS92300.1
43 33255–34856 533 Hypothetical protein gp_048 DLP5 98 2.00E-156 50 ATS92279.1
44 34856–35137 93 Hypothetical protein gp_049 DLP5 100 5.00E-35 64 ATS92378.1
45 35139–36056 305 Hypothetical protein gp_050 DLP5 100 0 90 ATS92301.1
46 36060–36251 63 Hypothetical protein BCCc 98 5.00E-08 46 WP_046196969.1
47 36389–36571 60 Hypothetical protein gp_052 DLP5 85 1.00E-19 78 ATS92407.1
48 36568–37128 186 Hypothetical protein gp_053 DLP5 100 5.00E-128 93 ATS92329.1
49 37125–38414 429 Helicase DLP5 100 0 90 ATS92282.1
50 38481–38981 166 Hypothetical protein gp_055 DLP5 100 2.00E-86 80 ATS92331.1
51 38974–39957 327 Primase DLP5 100 0 77 ATS92297.1
52 40036–40812 258 Hypothetical protein gp_057 DLP5 100 3.00E-157 89 ATS92312.1
53 40860–41075 71 Hypothetical protein gp_058 DLP5 100 4.00E-41 92 ATS92395.1
54 41072–42430 452 Superfamily II DNA or RNA helicase DLP5 100 0 90 ATS92280.1
55 42427–42828 133 Transcriptional regulator DLP5 100 6.00E-68 74 ATS92353.1
56 42831–43208 125 Hypothetical protein gp_061 DLP5 100 1.00E-62 81 ATS92362.1
57 43208–44425 405 RecA DLP5 100 0 90 ATS92285.1
58 44425–44799 124 Hypothetical protein gp_063 DLP5 100 9.00E-83 94 ATS92359.1
59 44799–45680 293 Hypothetical protein gp_064 DLP5 100 0 87 ATS92304.1
60 45677–46174 165 RuvC DLP5 99 5.00E-111 93 ATS92332.1
61 46152–46766 204 Hypothetical protein gp_066 DLP5 100 5.00E-108 78 ATS92321.1
62 46848–47657 269 Hypothetical protein gp_067 DLP5 96 2.00E-153 83 ATS92308.1
63 47840–47947 35 Hypothetical protein gp_069 DLP5 100 5.00E-13 94 ATS92417.1
64 48028–48504 158 Hypothetical protein gp_070 DLP5 100 3.00E-96 91 ATS92336.1
65 48839–49174 111 Hypothetical protein gp_071 DLP5 100 8.00E-60 82 ATS92357.1
66 50468–51409 313 Hypothetical protein gp_073 DLP5 100 6.00E-127 61 ATS92313.1
67 51397–51585 62 Hypothetical protein
68 51582–52145 187 Hypothetical protein gp_074 DLP5 100 2.00E-124 91 ATS92328.1
69 52165–52959 264 SPFH domain-containing protein DLP5 100 0 96 ATS92309.1
70 53058–53210 50 Hypothetical proteins
71 53207–53653 148 Hypothetical protein gp_077 DLP5 100 3.00E-87 87 ATS92343.1
72 53650–54000 116 Hypothetical protein gp_078 DLP5 100 7.00E-74 90 ATS92365.1
73 53993–55207 404 Hypothetical protein gp_079 DLP5 100 7.00E-96 44 ATS92288.1
74 55279–55548 113 Hypothetical protein gp_081 DLP5 100 1.00E-65 84 ATS92368.1
75 55558–55899 89 Hypothetical protein gp_080 DLP5 98 8.00E-37 66 ATS92369.1
76 55887–56930 347 UDP-glucose 4-epimerase DLP5 100 0 83 ATS92289.1
77 56962–57285 107 Hypothetical protein gp_083 DLP5 99 9.00E-56 78 ATS92370.1
78 57355–58425 356 Hypothetical protein gp_084 DLP5 100 0 73 ATS92290.1
79 58418–58939 173 Hypothetical protein gp_087 DLP5 45 6.00E-35 73 ATS92388.1
80 58936–59283 115 Hypothetical protein gp_086 DLP5 86 1.00E-36 64 ATS92361.1
81 59280–59456 58 Hypothetical protein gp_088 DLP5 100 4.00E-17 62 ATS92405.1
82 59465–59737 90 Hypothetical protein BV378_14040 Nostoc sp. RF31Y 97 8.00E-19 50 OUL25853.1
83 59737–59862 41 Hypothetical protein
84 59859–60128 89 Hypothetical protein
85 60132–60314 60 Hypothetical protein gp_089 DLP5 100 2.00E-05 53 ATS92403.1
86 60318–60737 139 Hypothetical protein gp_090 DLP5 84 3.00E-64 79 ATS92363.1
87 60734–61210 158 Hypothetical protein gp_091 DLP5 98 7.00E-60 62 ATS92339.1
88 61207–61458 83 Hypothetical protein gp_092 DLP5 100 1.00E-22 46 ATS92382.1
89 61455–61709 84 Hypothetical protein
90 61709–62359 216 Hypothetical protein gp_093 DLP5 100 3.00E-100 65 ATS92319.1
91 62362–62649 95 Hypothetical protein gp_094 DLP5 96 4.00E-35 66 ATS92381.1
92 62646–62885 79 Hypothetical protein gp_095 DLP5 100 4.00E-31 70 ATS92392.1
93 63161–63688 175 Rhomboid membrane protein DLP5 100 9.00E-96 78 ATS92322.1
94 63746–64342 198 Hypothetical protein gp_097 DLP5 98 8.00E-108 82 ATS92326.1
95 64339–64593 84 Hypothetical protein gp_098 DLP5 96 3.00E-31 68 ATS92385.1
96 64670–65308 212 PIG-L family deacetylase DLP5 100 6.00E-114 75 ATS92320.1
97 65311–66252 313 WcaG DLP5 100 0 95 ATS92298.1
98 66252–67298 348 WecE DLP5 100 0 87 ATS92291.1
99 67295–67975 226 Methyltransferase DLP5 100 1.00E-139 82 ATS92317.1
100 68043–68228 61 Hypothetical protein gp_103 DLP5 98 5.00E-20 62 ATS92400.1
101 68225–68647 140 Hypothetical protein gp_104 DLP5 97 8.00E-56 68 ATS92346.1
102 68647–70095 482 N-acetyl-alpha-D-glucosaminyl l-malate synthase DLP5 100 0 93 ATS92278.1
103 70092–70403 103 Hypothetical protein gp_106 DLP5 100 1.00E-36 59 ATS92372.1
104 70375–71229 284 ParBc DLP5 99 0 89 ATS92305.1
105 71229–71879 216 Hypothetical protein gp_108 DLP5 99 5.00E-125 85 ATS92318.1
106 71842–73755 637 Terminase large subunit DLP5 100 0 91 ATS92274.1
107 73767–74660 297 Hypothetical protein gp_110 DLP5 100 0 95 ATS92303.1
108 74657–75067 136 DUF3310 containing protein DLP5 100 1.00E-61 71 ATS92351.1
109 75129–75371 80 Hypothetical protein gp_112 DLP5 100 8.00E-37 74 ATS92390.1
110 75373–75765 130 Hypothetical protein gp_113 DLP5 92 7.00E-12 34 ATS92355.1
111 75841–75939 32 Hypothetical protein gp_114 DLP5 100 7.00E-09 81 ATS92418.1
112 75936–76253 105 Hypothetical protein gp_115 DLP5 96 6.00E-54 81 ATS92371.1
113 76250–76504 84 Hypothetical protein gp_116 DLP5 100 2.00E-42 79 ATS92387.1
114 76494–76859 121 Hypothetical protein gp_117 DLP5 98 6.00E-59 80 ATS92358.1
115 76859–77011 50 Hypothetical protein gp_118 DLP5 100 1.00E-22 88 ATS92412.1
116 77087–77335 82 Hypothetical protein gp_119 DLP5 100 2.00E-43 82 ATS92389.1
117 77389–78528 379 Hypothetical protein gp_120 DLP5 70 2.00E-143 94 ATS92286.1
118 78528–78878 116 Hypothetical protein gp_121 DLP5 99 4.00E-71 90 ATS92364.1
119 78904–79365 153 Hypothetical protein gp_122 DLP5 100 7.00E-78 75 ATS92340.1
120 79331–79561 76 Hypothetical protein gp_123 DLP5 100 3.00E-33 76 ATS92393.1
121 79558–79731 57 Hypothetical protein gp_124 DLP5 96 6.00E-23 78 ATS92404.1
122 79804–79920 38 Hypothetical protein
123 79920–80228 102 Hypothetical protein gp_125 DLP5 100 3.00E-59 87 ATS92373.1
124 80254–80988 244 Hypothetical protein gp_126 DLP5 100 8.00E-153 83 ATS92316.1
125 80985–81350 121 Hypothetical protein gp_127 DLP5 96 1.00E-64 79 ATS92356.1
126 81347–81523 58 Hypothetical protein
127 81516–81698 60 Hypothetical protein gp_128 DLP5 96 2.00E-29 86 ATS92402.1
128 81698–82180 160 DUF1643 containing protein DLP5 100 2.00E-88 80 ATS92337.1
129 82180–82515 111 Hypothetical protein gp_130 DLP5 90 2.00E-44 83 ATS92367.1
130 82589–83485 298 DNA ligase DLP5 100 0 92 ATS92302.1
131 83482–83895 137 Hypothetical protein gp_133 DLP5 100 4.00E-65 74 ATS92349.1
132 83895–84197 100 Hypothetical protein gp_134 DLP5 97 2.00E-47 77 ATS92375.1
133 84248–85459 403 Hypothetical protein gp_135 DLP5 100 0 81 ATS92284.1
134 85456–86028 190 Hypothetical protein gp_136 DLP5 100 3.00E-119 85 ATS92327.1
135 86122–88065 647 Pyruvate phosphate dikinase DLP5 100 0 84 ATS92273.1
136 88141–88527 128 Hypothetical protein gp_138 DLP5 98 7.00E-76 90 ATS92348.1
137 88527–88868 113 Hypothetical protein gp_139 DLP5 100 5.00E-63 86 ATS92366.1
138 88879–89238 119 Transcriptional repressor DLP5 95 3.00E-71 88 ATS92354.1
139 89228–89698 156 Tyrosine phosphatase family protein DLP5 99 5.00E-93 86 ATS92338.1
140 89740–90759 339 Hypothetical protein gp_142 DLP5 98 0 77 ATS92292.1
141 90756–91532 258 Thymidylate synthase DLP5 98 6.00E-121 72 ATS92311.1
142 91618–92493 291 Hypothetical protein gp_144 DLP5 97 1.00E-124 65 ATS92306.1
143 92483–92737 84 Hypothetical protein gp_145 DLP5 97 3.00E-35 71 ATS92386.1
144 92734–93231 165 Hypothetical protein gp_146 DLP5 96 1.00E-83 77 ATS92335.1
145 93260–95482 740 DNA polymerase I DLP5 100 0 85 ATS92272.1
146 95794–96030 78 Hypothetical protein
147 96134–96415 93 Hypothetical protein gp_149 DLP5 96 6.00E-52 87 ATS92379.1
148 96412–96741 109 Hypothetical protein gp_150 DLP5 100 2.00E-61 85 ATS92310.1

Results below 0.01 were not included and the function was annotated as hypothetical. aStenotrophomonas phage DLP5, bXylella phage Salvo, and cBurkholderia cepacia complex.