Table 1.
Alignment statistics of the MACE libraries.
| Sample | Replicate | Library size | Aligned reads | Reads aligned on mRNAs | |
|---|---|---|---|---|---|
| Tetrads | CO | 1 | 4,220,434 | 2,971,513 (70.4%) | 2,516,064 (59.6%) |
| 2 | 4,548,389 | 3,346,633 (73.6%) | 2,830,633 (62.2%) | ||
| 3 | 5,398,343 | 4,304,309 (79.7%) | 3,653,033 (67.7%) | ||
| HS | 1 | 6,917,504 | 5,068,102 (73.3%) | 4,136,556 (59.8%) | |
| 2 | 5,690,789 | 4,548,590 (79.9%) | 3,857,340 (67.8%) | ||
| 3 | 4,775,683 | 3,674,516 (76.9%) | 3,143,600 (65.8%) | ||
| Post-meiotic | CO | 1 | 7,221,666 | 6,051,418 (83.8%) | 5,345,146 (74.0%) |
| 2 | 8,131,060 | 6,682,864 (82.2%) | 5,858,333 (72.0%) | ||
| 3 | 5,115,229 | 4,311,698 (84.3%) | 3,819,011 (74.7%) | ||
| HS | 1 | 7,283,901 | 6,185,931 (84.9%) | 5,428,617 (74.5%) | |
| 2 | 6,345,970 | 5,401,924 (85.1%) | 4,780,752 (75.3%) | ||
| 3 | 2,311,857 | 1,935,023 (83.7%) | 1,638,078 (70.9%) | ||
| Mature | CO | 1 | 7,423,230 | 6,147,944 (82.8%) | 5,414,995 (72.9%) |
| 2 | 5,387,727 | 4,625,139 (85.8%) | 4,087,814 (75.9%) | ||
| 3 | 6,847,578 | 5,779,514 (84.4%) | 5,062,600 (73.9%) | ||
| HS | 1 | 3,493,375 | 2,789,352 (79.8%) | 2,449,650 (70.1%) | |
| 2 | 4,738,745 | 3,833,860 (80.9%) | 3,347,578 (70.6%) | ||
| 3 | 3,205,951 | 2,706,620 (84.4%) | 2,355,087 (73.5%) |
Shown are statistics for the MACE libraries of non- (CO) and heat-stressed (HS) tetrads, post-meiotic and mature pollen. For each biological replicate the library size, the number and percentage of aligned reads and the number and percentage of reads aligned on mRNAs is given.