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. 2020 Jul 2;14(7):e0008377. doi: 10.1371/journal.pntd.0008377

Fig 2. Phylogenetic tree of Salmonella Enteritidis pairs.

Fig 2

Maximum likelihood phylogenetic tree of Salmonella Enteritidis paired isolates, mapped on reference strain Salmonella Enteritidis P125109 (Accession Number = AM933172) and rooted on Salmonella Typhi 10040_15 (Accession Number = ERS1574281). The tree scale represents the number of SNPs, which are also annotated on the branches. The isolate names have a prefix representing the pair number followed by the study number of each isolate (S2 Table) and a suffix between brackets indicating the MVLA type. The bar on the right indicates the specimen of isolation (blood isolate (red) versus stool isolate (brown)).