Table 1.
Isolatea | Collection locality | Host plants | Collection year | MCGb | Group of NGS | Virus detectede | Source |
---|---|---|---|---|---|---|---|
W98 | Saga | Japanese pear | 1998 | 80 | Pool-3/2 | RnPV11 | Ikeda et al., 2004 |
W118 | Saga | Japanese pear | 1998 | 86 | Pool-3/1 | RnPV3, 12, 13 | Ikeda et al., 2004 |
W129 | Fukuoka | Japanese pear | 1998 | 88 | Pool-2 | RnPV25 | Ikeda et al., 2004 |
W442 | Hyogo | Unknown | 2000 | 169 | Pool-3/1 | RnPV18, 19 | This study |
W558 | Saga | Japanese pear | 1998 | 85 | Pool-1 | RnPV6 | Ikeda et al., 2004 |
W662 | Gunma | Apple | 2000 | 301 | Pool-1 | RnPV23, 24 | Ikeda et al., 2004 |
W744 | Saga | Japanese pear | 2001 | 325 | Pool-3/2 | RnPV1, 14–17 | Ikeda et al., 2004 |
W1030 | Nagano | Apple | 2009 | 139 | NAc | RnPV4 | Yaegashi et al., 2013 |
W1031 | Nagano | Apple | 2009 | 139 | Pool-4 | RnPV3, 4 | Yaegashi et al., 2013 |
W1040 | Nagano | Apple | 2009 | 139 | Pool-1 | RnPV5 (+one)f | Yaegashi et al., 2013 |
W1041 | Nagano | Apple | 2009 | 139 | NAc | RnPV5 | Yaegashi et al., 2013 |
W1050 | Nagano | Apple | 2009 | 139 | Pool-4 | RnPV22 | Yaegashi et al., 2013 |
W1126 | Iwate | Lacquer tree | 2011 | U1 | NAc | RnPV22 | From Dr. M. Tabata |
W1134 | Kagawa | Lacquer tree | 2011 | U13 | Pool-3/1 | RnPV20, 21 | From Dr. M. Tabata |
W1135 | Kagawa | Lacquer tree | 2011 | U14 | NAc | RnPV20 | From Dr. M. Tabata |
Rn459 | Malaga | Avocado | 2016 | unknown | NAd | RnPV10 | Arjona-Lopez et al., 2018 |
All isolates were collected in Japan, except for Rn459 isolated from Spain.
Mycelial compatibility group.
Not applicable. For these viruses, conventional cDNA libraries were constructed and subjected to Sanger sequencing.
Partial genomic sequence was reported by Arjona-Lopez et al. (2018).
Viral infection was confirmed by RT-PCR.
The partial genome sequence derived from an additional potential novel partitivirus besides RnPV5 was detected in the W1040 strain.