TABLE 2.
DEG Set | Total genes | Total annotated genes | COG | GO | KEGG | KOG | NR | Pfam | Swiss-Prot |
0 vs. 3 | 66 | 58 | 11 | 52 | 3 | 24 | 58 | 36 | 49 |
0 vs. 80 | 2630 | 2147 | 401 | 1740 | 178 | 664 | 2146 | 1161 | 1800 |
COG, Clusters of Orthologous Groups of proteins; GO, Gene ontology; KEGG, Kyoto Encyclopedia of Genes and Genomes; KOG, eukaryotic Orthologous Groups; NR, NCBI non-redundant nucleotide sequences; Pfam, Protein family; Swiss-Prot, A manually annotated and reviewed protein sequence database.