Table 1.
Chromosome (Chr) | Position | p-value | Resistant allele/susceptible allele | FDR | MAF | R2 | Allelic effect (mm) |
---|---|---|---|---|---|---|---|
01 | 5,594,597 | 5.08 × 10−5 | T/C | 0.02 | 0.38 | 0.32 | 29 |
15 | 13,665,369 | 9.76 × 10−5 | A/G | 0.04 | 0.32 | 0.15 | 15 |
Position: The physical position of the marker on the chromosome according to the G. max reference genome [Gmax_275 (Wm82.a2.v1)] [24]
FDR False discovery rate
MAF Minor allele frequency
R2: Indicates the proportion of total phenotypic variation accounted for by the marker
Allelic effect: average change in lesion length following allele substitution