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. 2020 May 7;20:195. doi: 10.1186/s12870-020-02401-8

Table 1.

Characteristics of the markers most highly associated (peak SNPs) with lesion length

Chromosome (Chr) Position p-value Resistant allele/susceptible allele FDR MAF R2 Allelic effect (mm)
01 5,594,597 5.08 × 10−5 T/C 0.02 0.38 0.32 29
15 13,665,369 9.76 × 10−5 A/G 0.04 0.32 0.15 15

Position: The physical position of the marker on the chromosome according to the G. max reference genome [Gmax_275 (Wm82.a2.v1)] [24]

FDR False discovery rate

MAF Minor allele frequency

R2: Indicates the proportion of total phenotypic variation accounted for by the marker

Allelic effect: average change in lesion length following allele substitution