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. 2020 Jun 25;11:1361. doi: 10.3389/fmicb.2020.01361

TABLE 3.

Prokaryote ASVs with highest functional coreness in the dataset of the co-culture experiment.

Host state
BLAST top-hit
Module ASV code Functional coreness Medium A Medium B Medium C Taxon Description Cover Identity Accession
1 asv_0041 239.4 12.547 −6.274 −6.262 Bacteria Mucilaginibacter oryzae 100% 98.42% AB682426.1
asv_0125 225.3 11.660 −5.835 −5.831 Bacteria Mucilaginibacter herbaticus 100% 99.60% NR_109510.1
asv_0047 83.8 17.267 −8.640 −8.637 Bacteria Terriglobus roseus 100% 100.00% LT629690.1
asv_0018 77.4 19.123 −10.071 −9.024 Bacteria Paraburkholderia kirstenboschensis 100% 100.00% MN204221.1
asv_0058 67.2 17.950 −8.964 −8.953 Bacteria Mucilaginibacter boryungensis 100% 99.21% NR_108986.1
3 asv_0050 345.3 7.875 −3.949 −3.933 Bacteria Mucilaginibacter puniceus 100% 99.21% NR_152668.1
asv_0153 100.0 5.708 −2.858 −2.850 Bacteria Sphingomonas polyaromaticivorans 100% 99.21% LN890119.1
asv_0118 57.0 6.635 −3.339 −3.328 Bacteria Bdellovibrio bacteriovorus 100% 96.84% KX450994.1
asv_0131 41.3 7.592 −3.804 −3.782 Bacteria Clostridium pasteurianum 100% 100.00% CP003261.1
asv_0088 39.8 9.018 −3.634 −5.396 Bacteria Pelosinus fermentans 100% 98.81% CP010978.1

For the two network modules with the highest specificity values for Medium A [smodule(h,j); Figure 6], top-5 ASVs with highest functional coreness are shown. A functional coreness score, specificity for media [s(i,j)], and NCBI BLAST top-hit results are indicated for each ASV.