Table 1:
Compressor versions
| A) Specialized sequence compressors | |
|---|---|
| Compressor | Version |
| 2bit | "faToTwoBit" and "twoBitToFa" binaries dated 7 November 2018 |
| ac | AC 1.1, 29 January 2020 |
| alapy | ALAPY 1.3.0, 25 July 2017 |
| beetl | BEETL, commit 327cc65, 14 November 2019 |
| blast | "convert2blastmask", "makeblastdb", and "blastdbcmd" binaries from BLAST 2.8.1+, 26 November 2018 |
| dcom | DNA-COMPACT, latest public source 29 August 2013 |
| dlim | DELIMINATE, version 1.3c, 2012 |
| dnaX | dnaX 0.1.0, 3 August 2014 |
| dsrc | DSRC 2.02, commit 5eda82c, 4 June 2015 |
| fastqz | fastqz 1.5, commit 39b2bbc, 15 March 2012 |
| fqs | FQSqueezer 0.1, commit 5741fc5, 17 May 2019 |
| fqzcomp | fqzcomp 4.6, commit 96f2f61, 2 December 2019 |
| geco | GeCo: v.2.1, 24 December 2016 |
| GeCo2: v.1.1, 2 February 2019 | |
| gtz | GTX.Zip PROFESSIONAL-2.1.3-V-2020-03-18 07:11:20, binary |
| harc | HARC, commit cf35caf, 4 October 2019 |
| jarvis | JARVIS v.1.1, commit d7daef5, 30 April 2019 |
| kic | KIC binary, 0.2, 25 November 2015 |
| leon | Leon, 1.0.0, 27 February 2016, Linux binary |
| lfastqc | LFastqC, commit 60e5fda, 28 February 2019, with fixes |
| lfqc | LFQC, commit 59f56e0, 6 January 2016 |
| mfc | MFCompress,s1.01, 3 September 2013, 64-bit Linux binary |
| minicom | Minicom, commit 2360dd9, 9 September 2019 |
| naf | NAF, 1.1.0, 1 October 2019 |
| nuht | NUHT, commit 08a42a8, 26 September 2018, Linux binary |
| pfish | Pufferfish, v.1.0 alpha, 11 April 2012 |
| quip | Quip, commit 9165bb5, 1.1.8-8-g9165bb5, 17 December 2017 |
| spring | SPRING, commit 6536b1b, 28 November 2019 |
| uht | UHT, binary from 27 December 2016 |
| xm | XM (eXpert-Model), 3.0, commit 9b9ea57, 7 January 2019 |
| B) General-purpose compressors | |
| bcm | 1.30, 21 January 2018 |
| brieflz | 1.3.0, 15 February 2020 |
| brotli | 1.0.7, 23 October 2018 |
| bsc | 3.1.0, 1 January 2016 |
| bzip2 | 1.0.6, 6 September 2010 |
| cmix | 17, 24 March 2019 |
| gzip | 1.6, 9 June 2013 |
| lizard | 1.0.0, 8 March 2019 |
| lz4 | 1.9.1, 24 April 2019 |
| lzop | 1.04, 10 August 2017 |
| lzturbo | 1.2, 11 August 2014 |
| nakamichi | 9 May 2020 |
| pbzip2 | 1.1.13, 18 December 2015 |
| pigz | 2.4, 26 December 2017 |
| snzip | 1.0.4, 2 October 2016 |
| xz | 5.2.2, 29 September 2015 |
| zpaq | 7.15, 17 August 2016 |
| zpipe | 2.01, 23 December 2010 |
| zstd | 1.4.5, 22 May 2020 |