Table 2.
Genes encoding cell wall anchor domain proteins and related proteins in Lactobacillus reuteri 6475
Locus tag HMPREF0536 | Homologue in strain JCM 1112 | Annotation/features/comments | Size (aa) | Mutant analysed |
10255 | LAR_0227 | Sortase | 234 | Yes |
10146 | LAR_0989 | LPxTG protein, Pilus_PilP and Rib regions | 630 | Yes |
10154 | LAR_0983 | LPxTG protein, 5′-nucleotidase/2′,3′-cyclic phosphodiesterase | 752 | Yes |
10633 | LAR_0958 | LPxTG protein, YSIRK-G/S signal sequence | 1030 | Yes |
10706 | LAR_0903 | LPxTG protein, a second putative start 87 bp downstream (size 272 aa) | 301 | NA |
10802 | LAR_0813 | LPxTG protein, amidase, a second putative start 25 bp downstream (size 637 aa) | 645 | Yes |
11242-11241 | LAR_1193-1192 | 11242: YSIRK-G/S signal sequence; 11241: LPxTG motif; ORFs separated by frame shift, putative pseudogene | 328* | NA |
12042 | LAR_0089 | YSIRK-G/S signal sequence, truncated, no LPxTG motif, putative pseudogene | 607* | NA |
11993 | LAR_0044 | C-terminal membrane-anchored cell surface protein | 951 | Yes |
na, Not available.
Truncated genes.