Table 2.
Protein | human Scn | human Scn | human Scn | human Scn | human Scn | human Scn | human Scn |
Mutations | C87S/W79A/R81A/Y106F | C87S/K125A | C87S/K134A | C87S/K125A/K134A | C87S | C87S | C87S |
Ligand | Fe-ENT | Fe-ENT | Fe-ENT | Fe-ENT | (Fe-PCH) | (Fe-NE) | Fe-(NE) + DHBA |
Accession Code | 3T1D | 3CMP | 3I0A | 3HWD | 6O5D | – | – |
Space group | P41212 | P41212 | P41212 | P41212 | P41212 | P41212 | P41212 |
Cell dimensions | |||||||
a = b, c (Å) | 114.75, 119.07 | 114.91, 118.83 | 114.25, 117.95 | 115.83, 119.32 | 114.8, 119.24 | 115.29, 118.31 | 114.97, 118.63 |
α = β = γ (°) | 90 | 90 | 90 | 90 | 90 | 90 | 90 |
Resolution (Å) | 50.0–2.30 (2.36–2.30) |
50.0–2.80 (2.87–2.80) |
50.0–2.60 (2.70–2.60) |
50.0–2.95 (3.10–2.95) |
50.0–2.40* (2.46–2.40) |
50.0–2.40 (2.44–2.40) |
50.0–2.25 (2.29–2.25) |
Rmerge | 0.072 (0.52) | 0.077 (0.41) | 0.123 (0.39) | 0.084 (0.36) | NR (NR)* | 0.077 (0.47) | 0.074 (0.55) |
I/σ(I) | 10.5 (8.5) | 26.0 (5.9) | 12.4 (4.9) | 25.3 (5.8) | 5.78 (NR)* | 49.5 (7.4) | 56.3 (7.2) |
Completeness (%) | 96.9 (99.1) | 99.0 (99.5) | 99.9 (99.7) | 91.0 (93.7) | 95.7 (97.4)* | 99.3 (100.0) | 100 (100) |
Redundancy | 5.7 (4.8) | 9.8 (9.9) | 8.7 (8.6) | 25.9 (6.2) | NR (8.4)* | 8.0 (8.8) | 14.1 (14.7) |
Fe peak heights (A, B, C; σ) | None observed | 11, 5, 13 | 16, 8, 16 | None observed | None observed | None observed | 10, 3, 10 |
Rwork/Rfree | 0.189/0.228 | 0.248/0.304 | 0.255/0.300 | 0.257/0.303 | 0.235/0.253 | – | – |
No. atoms | |||||||
Protein | 4130 | 3911 | 3902 | 3865 | 4026 | – | – |
Heterogen | 114 | 161 | 145 | 7 | 37 | – | – |
Waters | 259 | 93 | 100 | 51 | 73 | – | – |
Wilson B (Å2) | 32.3 | 44.0 | 52.3 | 51.6 | 35.8 | – | – |
Average B (Å2) | 32.0 | 39.0 | 46.0 | 43.0 | 27.6 | – | – |
R.m.s. deviations | |||||||
Bond lengths (Å) | 0.018 | 0.005 | 0.006 | 0.005 | 0.010 | – | – |
Bond angles (°) | 1.97 | 0.941 | 0.924 | 0.792 | 1.390 | – | – |
Values in parentheses are for the highest-resolution shell. *: From PDB entry 3U03. NR: Not reported.