Table 1. Effects of strongest GMR-hFUSR521C and GMR-hTDP-43M337V suppressors on GMR-c9orf72(G4C2)30-related photoreceptor neurodegeneration.
Column A | Column B | Column C | Column D | Column E | Column F | Column G |
---|---|---|---|---|---|---|
Exelixis insert | Fus modification | TDP-43 Modification | C9orf72 Modification | % c9orf72 Degeneration | % c9orf72 Degeneration | % c9orf72 Degeneration |
Week 1 | Week 3 | Week 6 | ||||
c00800 | S2 | S3 | S3 | 0 | 0 | 1.7 |
c01016 | S2 | S2 | S3 | 2.6 | 12.2 | 58.5 |
c01295 | S1 | S1 | S3 | 6.8 | 17.6 | 53.4 |
c01399 | S2 | S2 | S1 | 14.2 | 18.4 | 50.5 |
c02909 | S1 | S2 | S3 | 4.2 | 10.4 | 42.4 |
c03244 | S2 | S1 | S3 | 8.1 | 12.9 | 34.9 |
c04205 | S2 | S1 | S3 | 9 | 14.5 | 31.8 |
c04522 | S1 | S1 | S3 | 0 | 8.9 | 46.5 |
c04582 | S2 | S2 | S2 | 3.1 | 26.1 | Not done |
c05668 | S2 | S2 | S3 | 1.5 | 3.1 | 18.2 |
c06325 | S2 | S1 | S1 | 9.4 | 25.3 | 64.8 |
c07023 | S2 | S3 | S3 | 4.8 | 9.8 | 46.1 |
d00123 | S2 | S2 | S3 | 0 | 4.8 | 0 |
d00147 | S2 | S1 | S1 | 4.4 | 26.1 | Not done |
d01275 | S3 | S3 | S3 | 0.7 | 0.8 | 0.8 |
d01345 | S2 | S2 | S3 | 1.9 | 9.6 | 36 |
d02380 | S2 | S1 | S3 | 0 | 3.8 | 39.6 |
d02712 | S1 | S2 | S2 | 7.4 | 8 | 70 |
d02769 | S2 | S2 | S3 | 0 | 0 | 8.3 |
d02833 | S1 | S2 | S2 | 0 | 7.1 | Not done |
d02874 | S1 | S1 | S1 | 5.7 | 45.7 | 67.6 |
d03208 | S2 | S2 | S3 | 0 | 8.7 | 6.1 |
d03562 | S3 | S3 | S3 | 0.7 | 7 | 25.6 |
d04116 | S1 | S1 | S3 | 10.8 | 24 | 46.2 |
d04883 | S2 | S2 | S3 | 5.8 | 29.8 | 61.4 |
d05297 | S2 | S1 | S1 | 6.6 | 26.9 | Not done |
d05884 | S2 | S1 | S2 | 2.4 | 28.6 | 70.3 |
d06126 | S3 | S3 | S2 | 8.9 | 53.4 | Not done |
d07098 | S1 | S1 | S2 | 0 | 16.4 | 23.4 |
d08551 | S2 | S2 | S3 | 0 | 0 | 0 |
d09937 | S2 | S2 | S2 | 34.5 | 36.9 | 62.5 |
d10223 | S2 | S3 | S2 | 0 | 18.4 | 60 |
d10376 | S3 | S2 | S3 | 0 | 1.2 | 18.5 |
d10800 | S2 | S2 | S3 | 0 | 0 | 0 |
d11666 | S2 | S2 | S3 | 5.6 | 9.4 | 26.5 |
e00530 | S2 | S2 | S3 | 0.7 | 3.3 | 16.5 |
e00651 | S2 | S1 | S3 | 7.3 | 11.9 | 44.2 |
e00985 | S2 | S2 | S3 | 11.1 | 20.6 | 51.6 |
e01238 | S2 | S2 | S3 | 1.1 | 7.1 | 4 |
e01976 | S2 | S2 | S3 | 0 | 5.9 | 12.5 |
e02098 | S2 | S2 | S3 | 3.4 | 15.2 | 43.8 |
e02166 | S2 | S2 | S1 | 6.9 | 37.9 | 55.2 |
e02234 | S1 | S2 | S1 | 15.2 | 27.7 | 54.3 |
e02236 | S2 | S1 | S1 | 8.2 | 34.2 | 59.6 |
e02284 | S3 | S3 | S3 | 7 | 19.1 | 43.9 |
e02535 | S2 | S2 | S3 | 13.5 | 19.4 | 67.6 |
e02684 | S2 | S1 | S2 | 13.5 | 30.8 | 53.9 |
e02699 | S3 | S1 | S3 | 7.1 | 10 | 29.2 |
e03409 | S2 | S2 | S1 | 16.9 | 20.4 | Not done |
e04015 | S2 | S2 | S2 | 0 | 11.9 | 27.7 |
e04545 | S2 | S2 | S3 | 6.1 | 13.2 | 40.2 |
f01587 | S1 | S1 | S2 | 10.1 | 16.5 | 12.8 |
f03242 | S3 | S2 | S3 | 0 | 0 | 16.2 |
f03756 | S2 | S2 | S3 | 1.3 | 13 | 11.1 |
f05408 | S2 | S3 | S3 | 0 | 0 | 0 |
f06593 | S3 | S3 | S3 | 0 | 0 | 0 |
c03600 | S2 | S2 | NE | 12.3 | 26.9 | 60.9 |
c04473 | S2 | S2 | NE | 18 | 26.5 | 65.9 |
c04797 | S2 | S2 | NE | 24.4 | 39.3 | 72.9 |
c05977 | S2 | S1 | NE | 9.2 | 29.4 | Not done |
c06293 | S2 | S2 | NE | 18.2 | 34.5 | 68.5 |
c06703 | S1 | S2 | NE | 32.3 | 61.1 | 82.4 |
c06744 | S2 | S2 | NE | 20.1 | 34.8 | 63.7 |
c07042 | S1 | S1 | NE | 18.9 | 40.9 | 73.3 |
c07155 | S2 | S2 | NE | 22.8 | 49.4 | 67.7 |
d04075 | S2 | S3 | NE | 12.4 | 26.7 | Not done |
d07488 | S2 | S2 | NE | 35.7 | 30.8 | 76.9 |
d08578 | S2 | S2 | NE | 26.5 | 51.5 | 77.4 |
d09179 | S2 | S1 | NE | Not done | 56.1 | 72.2 |
e00355 | S2 | S2 | NE | 22.5 | 31.7 | 60.3 |
e00777 | S2 | S2 | NE | 15.5 | 24.9 | 41.7 |
e00785 | S2 | S2 | NE | 24 | 32.9 | 75.6 |
e02741 | S2 | S2 | NE | 27.1 | 47.5 | 79 |
f02738 | S1 | S1 | NE | 18.3 | 22.4 | 76.8 |
c03467 | S2 | S2 | E2 | 41.5 | 52.5 | Not done |
c03635 | S2 | S2 | E3 | 23.6 | 73.1 | 95.7 |
c05849 | S2 | S1 | E1 | 26.7 | 57.5 | Not done |
d02986 | S2 | S2 | E3 | 13.3 | 60.2 | 82.3 |
d06616 | S2 | S2 | E3 | 60 | 80 | 87.5 |
e02580 | S2 | S3 | E3 | 28.4 | 59 | 91.5 |
e04200 | S2 | S2 | E2 | 66.9 | 85 | Not done |
f01201 | S2 | S2 | E3 | 58.3 | 78.3 | 98.2 |
f03408 | S1 | S1 | E1 | 20.4 | 50 | 77.8 |
f05963 | S1 | S2 | E3 | 12.5 | 68.3 | 80.8 |
Effects of 84 overlapping suppressors of GMR-hFUSR521C and GMR-hTDP-43M337V degenerative eye phenotypes in a GMR-c9orf72(G4C2)30 model of progressive neurodegeneration. Insert number is listed in Column A, followed by the observed modification in the GMR-hFUSR521C (Column B) and GMR-hTDP-43M337V (Column C) screening strains. In Columns B and C, S1, S2, and S3 refer to the qualitative strength of suppression, where S1 is weak, S2 is moderate, and S3 is strong suppression. Column D depicts modification effect of the insertion on the GMR-c9orf72(G4C2)30 model, where S is suppression, E is enhancement, and NE is no effect. Columns E, F, and G provide the penetrance of the neurodegenerative phenotype at weeks 1, 3, and 6. S1/E1 is suppression/enhancement at one time point, S2/E2 is suppression/enhancement at two time points, and S3/E3 is suppression/enhancement at all three time points. Crosses were performed in batches and each insert was compared to control crosses (GMR-c9orf72(G4C2)30 crossed to isoA) for that particular batch (data not shown).