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. 2020 Jun 16;9:e56178. doi: 10.7554/eLife.56178

Table 2. CHD4 mutations in cancer and Sifrim-Hitz-Weiss syndrome.

Mutated
Residue
Location Predicted effect based on structure Biochemical observations
Cancer
Cys464Tyr PHD finger 2 Disruption of Zn2+ binding in PHD finger 2 Reduction in ATPase activity (Kovač et al., 2018)
Val558Phe Double chromodomain Reduced ATPase activity (Kovač et al., 2018)
Arg572Gln Double chromodomain Disruption of contact with tracking strand Reduced DNA binding affinity, Loss of full remodeling activity and ATPase activity (Kovač et al., 2018)
Leu912Val ATPase lobe 2 No prediction made Reduction of ATPase activity (Kovač et al., 2018)
His1151Arg ATPase lobe 2 In close proximity to motif Va, might disrupt contact of Trp1148 Reduction of ATPase activity, abolishment of remodeling activity (Kovač et al., 2018)
Arg1162Gln ATPase lobe 2, motif VI Located in ATPase motif VI (arginine finger), Disruption of interaction with ATP Reduction of ATPase activity (Kovač et al., 2018)
His1196Tyr ATPase lobe 2 Located in the C-terminal bridge region, Removes negative regulation Speed of chromatin remodeling is increased and better nucleosome centering capability (Kovač et al., 2018)
Leu1215 ATPase lobe 2/C-terminal bridge Not located in modeled region
Sifrim-Hitz-Weiss syndrome (Sifrim et al., 2016; Weiss et al., 2016)
Cys467Tyr PHD finger 2 Disruption of Zn2+ binding in PHD finger 2
Ser851Tyr ATPase lobe 1
Gly1003Asp ATPase lobe 2 Disruption of contact with H3
Arg1068His ATPase lobe 2 Disruption of structural integrity of RecA fold
Arg1127Gln ATPase lobe 2 Disruption of contact with DNA minor groove, equivalent arginine residue in SMARCA4 is implicated in ‘Coffin Siris syndrome’
Trp1148Leu ATPase lobe 2, motif Va Disruption of contact with guide strand Uncoupling of ATPase activity and chromatin remodeling (Liu et al., 2017)
Arg1173Leu Destabilization
Val1608Ile Not located in modeled region