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. 2020 Jun 30;8:711. doi: 10.3389/fbioe.2020.00711

TABLE 1.

List of selected Web-sites for gRNA design in multi-species.

Name Link PAM Organism Function References
CHOPCHOP v3 http://chopchop.cbu.uib.no Most reported PAMs or a self-defined sequence Over 200 genomes Knock out/knock in/activation/repression/Nanopore enrichment Labun et al., 2019
E-CRISPR http://www.e-crisp.org/ Most reported PAMs Over 50 genomes Single design/paired designs Heigwer et al., 2014
ATUM https://www.atum.bio/eCommerce/cas9/input NGG/NAG Homo sapiens/Mus musculus/Saccharomyces cerevisiae/Escherichia coli/Arabidopsis thaliana
CRISPRdirect https://crispr.dbcls.jp/ Self-defined PAM Over 200 species Naito et al., 2015
CRISPR-ERA http://crisprera.stanford.edu/ NGG Human/mouse/rat/zebrafish/ D. melanogaster/ C. elegans/S. cerevisiae/ E. coli/B. subtilis Gene editing/activation/repression Liu et al., 2015
CC TOP https://crispr.cos.uni-heidelberg.de Most reported PAMs 102 species gRNA and off-target prediction Stemmer et al., 2015