TABLE 1.
Name | Link | PAM | Organism | Function | References |
CHOPCHOP v3 | http://chopchop.cbu.uib.no | Most reported PAMs or a self-defined sequence | Over 200 genomes | Knock out/knock in/activation/repression/Nanopore enrichment | Labun et al., 2019 |
E-CRISPR | http://www.e-crisp.org/ | Most reported PAMs | Over 50 genomes | Single design/paired designs | Heigwer et al., 2014 |
ATUM | https://www.atum.bio/eCommerce/cas9/input | NGG/NAG | Homo sapiens/Mus musculus/Saccharomyces cerevisiae/Escherichia coli/Arabidopsis thaliana | ||
CRISPRdirect | https://crispr.dbcls.jp/ | Self-defined PAM | Over 200 species | Naito et al., 2015 | |
CRISPR-ERA | http://crisprera.stanford.edu/ | NGG | Human/mouse/rat/zebrafish/ D. melanogaster/ C. elegans/S. cerevisiae/ E. coli/B. subtilis | Gene editing/activation/repression | Liu et al., 2015 |
CC TOP | https://crispr.cos.uni-heidelberg.de | Most reported PAMs | 102 species | gRNA and off-target prediction | Stemmer et al., 2015 |