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. 2020 Jun 9;18:118–125. doi: 10.1016/j.omto.2020.06.007

Table 4.

False-Positive Report Probability Analysis for Significant Findings

Genotype OR (95% CI) pa Statistical Powerb Prior Probability
0.25 0.1 0.01 0.001 0.0001
rs1853259 GG versus AG/AA

<17 months 1.87 (1.21–2.87) 0.005 0.161 0.077 0.201 0.734 0.965 0.996

rs7766006 G > T

GT versus GG 0.70 (0.53–0.92) 0.010 0.714 0.039 0.108 0.571 0.931 0.993
GT/TT versus GG 0.74 (0.57–0.95) 0.017 0.769 0.062 0.164 0.684 0.956 0.995
<17 months 0.60 (0.42–0.85) 0.004 0.274 0.044 0.121 0.603 0.939 0.994
Female 0.66 (0.45–0.99) 0.043 0.483 0.212 0.447 0.899 0.989 0.999
Stage I + II 0.67 (0.48–0.94) 0.019 0.512 0.100 0.250 0.786 0.974 0.997

Risk Genotypes

2 versus 0 1.39 (1.02–1.88) 0.036 0.854 0.111 0.272 0.805 0.976 0.998
<17 months 1.64 (1.15–2.32) 0.006 0.318 0.052 0.141 0.644 0.948 0.995

Haplotypes

AGT versus GAT 1.56 (1.01–2.41) 0.043 0.491 0.208 0.441 0.897 0.989 0.999
AAG versus GAT 6.25 (1.38–28.29) 0.018 0.037 0.583 0.808 0.979 0.998 1.000

The results were in bold if the false-positive report probability was less than 0.200. OR, odds ratio; CI, confidence interval.

a

Chi-square test was used to calculate the genotype frequency distributions.

b

Statistical power was calculated using the number of observations in each subgroup and the corresponding ORs and p values in this table.