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. 2020 Jul 6;20:197. doi: 10.1186/s12866-020-01886-5

Table 5.

The linkage of QRDRs mutations with antimicrobial susceptibility profile

Isolate No. Serotype MAR MIC (μg/ml) Mutations-changes in codons
CIP LEV gyrA gyrB parC parE
1 Typhimurium 0.33 <=0.25 <=0.12
2 Typhimurium 0.46 0.5 0.5
3 Typhimurium 0.63 1 2 CTT → CTC, TCC → TCTc GTT → GTC, CAC → CAT, CAT→CAC, GCG → GCA, TCC → TCTd ACT→ACGe, CAC → CATf
4 Bovismorbificans 0.38 1 0.5 GAC → GGCa CTT → CTC, TCC → TCT ACT, CAC → CAT
5 Typhimurium 0.50 1 0.5 GAC → GGC CTT → CTC, TCC → TCT ACT, CAC → CAT
6 Enteritidis 0.33 0.5 2 CTT → CTC, TCC → TCT ACT, CAC → CAT
7 London 0.33 1 1 CTT → CTC, TCC → TCT GTT → GTC, CAC → CAT, CAT→CAC, GCG → GCA, TCC → TCT ACT, CAC → CAT
8 Typhimurium 0.33 2 1 GAC → AACb
9 Agona 0.63 1 1 CTT → CTC, TCC → TCT GTT → GTC, CAC → CAT, CAT→CAC, GCG → GCA, TCC → TCT ACT→ACG, CAC → CAT
10 London 0.42 1 1 GAC → AAC CTT → CTC, TCC → TCT GTT → GTC, CAC → CAT, CAT→CAC, GCG → GCA, TCC → TCT
11 Litchfield 0.25 1 1 GAC → AAC CTT → CTC, TCC → TCT
12 4, 5, 12, i: - 0.21 1 1
13 Enteritidis 0.08 1 1 GAC → AAC CTT → CTC, TCC → TCT ACT, CAC → CAT
14 London 0.13 2 0.5 GAC → AAC CTT → CTC, TCC → TCT GTT → GTC, CAC → CAT, CAT→CAC, GCG → GCA, TCC → TCT ACT→ACG, CAC → CAT
15 4, 5, 12, i: - 0.50 2 2 GAC → AAC
16 untypable 0.42 2 4 GAC → AAC
17 4, 5, 12, i: - 0.42 > = 4 4 GAC → AAC
18 Typhimurium 0.42 2 2 GAC → AAC
19 Typhimurium 0.63 > = 4 > = 8 GAC → AAC
20 Typhimurium 0.46 2 4 GAC → AAC
21 Typhimurium 0.58 > = 4 4 GAC → AAC

Base pair changes in bold type.

MIC minimum inhibitory concentration, CIP ciprofloxacin, LEV levofloxacin.

- No mutation

aAmino acid alteration is Asp-87 → Gly.

bAmino acid alteration is Asp-87 → Asn.

cAmino acid alterations are Leu-462 → Leu, Ser-464 → Ser.

dAmino acid alterations are Val-67 → Val, His-75 → His, His-77 → His, Ala-117 → Ala, Ser-123 → Ser.

eAmino acid alteration is Thr-500 → Thr.

fAmino acid alteration is His-509 → His.