Fig. 3 |. Axes of variation among EMT perturbation conditions.

a, PHATE embedding of cells from all 300 experimental conditions, colored by cell subtype. b, Heatmap representing log₂ protein expression levels for each cell subpopulation representing its respective cell subtype. c, Diffusion map embedding of control and drug-inhibited conditions, colored by clusters determined by hierarchical clustering. d, Individual inhibitors assigned to each inhibitor group. Histograms represent bin-wise mean of relative frequency of each cell subtype for all inhibitors in a given group. The full list of inhibitors in each group can be found in Supplementary Table 3.