Table 2. Genes significantly correlated with plasma Cystatin C, and their eQTLs.
Gene name | ENTREZID | Gene location | Correlation | eQTL | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Symbol | Chr | Stand | Start (Mb) | r | p | adj.p | SNP Position | LOD | |||
Chr | Mb | ||||||||||
T cell receptor alpha variable 16D-DV11 | Trav16d-dv11 | 547329 | Chr14 | + | 54.20 | 0.522 | 2.98x10−7 | 0.005 | |||
Cystatin C | Cst3 | 13010 | Chr2 | — | 148.87 | 0.517 | 4.11x10−7 | 0.005 | Chr2 | 148.7 | 15.99 |
Platelet/endothelial cell adhesion molecule 1 | Pecam1 | 18613 | Chr11 | — | 106.65 | 0.502 | 9.67x10−7 | 0.006 | Chr6 | 136.7 | 9.50 |
Leupaxin | Lpxn | 107321 | Chr19 | + | 12.80 | 0.500 | 1.09x10−6 | 0.006 | |||
FYVE, RhoGEF and PH domain containing 2 | Fgd2 | 26382 | Chr17 | + | 29.36 | 0.476 | 4.10x10−6 | 0.019 | |||
Ribonuclease, RNase A family, 6 | Rnase6 | 78416 | Chr14 | + | 51.13 | 0.469 | 5.93x10−6 | 0.023 | |||
Cytokine receptor-like factor 3 | Crlf3 | 54394 | Chr11 | — | 80.05 | 0.461 | 9.03x10−6 | 0.030 | |||
Formin binding protein 1 | Fnbp1 | 14269 | Chr2 | — | 31.03 | 0.454 | 1.25x10−5 | 0.037 | |||
Zinc finger protein 768 | Zfp768 | 233890 | Chr7 | — | 127.34 | −0.449 | 1.62x10−5 | 0.043 | |||
Protein kinase C, eta | Prkch | 18755 | Chr12 | + | 73.58 | 0.445 | 1.98x10−5 | 0.043 | |||
Selectin, platelet (p-selectin) ligand | Selplg | 20345 | Chr5 | — | 113.82 | 0.445 | 1.99x10−5 | 0.043 |