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Alignment of A. rabiei ArD2 scaffolds to the 33 nuclear ArME14 contigs using NUCMER. Unique matches representing homologous nucleotide sequences between the two assemblies are indicated in blue, and repeat-rich nucleotide sequence that characterizes repetitive and AT-rich genomic regions are indicated by non-unique matches shown in red. Presumed non-assembled or absent sections from the ArD2 genome are represented by white space along each of the ArME14 reference contigs.
