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. 2020 Apr 28;10(7):2131–2140. doi: 10.1534/g3.120.401265

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Copyright © 2020 Mohd Shah et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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CIRCOS plot of key features of the A. rabiei ArME14 reference genome. Tracks labeled from outside: (A) The 26 largest contigs with size scale in Mb; (B) Annotated genes in scale (green) and telomeres (not to scale) (blue); (C) Locations (not to scale) of predicted effector genes (red), CAZyme genes (green), and predicted secondary metabolite clusters (purple and in scale); (D) Gene density with 20 Kb moving average window; (E) percent GC content with 50 Kb moving average window; (F) Transposable elements and repetitive DNA sequence regions. LINE, LTR, LARD, SINE and TRIM elements (blue), TIR, Helitron and MITE elements (red), SSRs (orange), No category, LTR/TIR, PLE/LARD and potential host gene (gray); (G) TE and repetitive DNA density with 20 Kb moving average window. An SVG version of this figure (Figure_S2) is included in the Supplementary Data to enable closer inspection of genome features.