Table 4.

List of SNPs significantly associated with longevity (LONG), age at first calving (AFC) and direct genetic effects for calf weight at 4 months (DCW4) identified by GWAS, with corresponding slope (Beta) and standard error (SE), proportion of the variance explained by the SNP (PVE), chromosome location CHR—Position), significance (p-value), type of location (Type) and associated genes (Feature; NA: not applicable).

Trait	SNP Name	Beta	SE	PVE	CHR	Position	p	Type	Feature
LONG	rs110680473	2.64	0.53	0.37	1	79190806	9.53 × 10−7	intergenic	NA
	rs110454414	2.08	0.58	0.23	1	82440177	2.14 × 10−6	intergenic	NA
	rs110789800	2.25	0.49	0.33	1	76375060	7.28 × 10−6	upstream gene variant	GMNC
	rs110554326	2.62	0.59	0.32	1	85965329	9.47 × 10−6	Intergenic	NA
	rs41635194	1.84	0.43	0.30	1	86011556	2.54 × 10−5	Intergenic	NA
	rs41597797	2.52	0.59	0.30	8	97033809	3.20 × 10−5	intron variant	RAD23B
	rs42443533	−0.74	0.18	0.29	1	107758823	3.42 × 10−5	Intergenic	NA
	rs42452113	−0.56	0.14	0.29	1	104139607	4.62 × 10−5	Intergenic	NA
	rs110589031	1.49	0.36	0.29	8	52721756	4.84 × 10−5	upstream gene variant	PRUNE2
	rs43096527	1.49	0.36	0.29	8	52655614	4.84 × 10−5	Intergenic	NA
	rs41609616	1.91	0.47	0.28	8	96631094	4.96 × 10−5	Intergenic	NA
AFC	rs29021075	−34.06	8.15	0.29	5	29913746	2.72 × 10−5	upstream gene variant	AQP5
DCW4	rs110789957				28	33061971	1.51 × 10−5	Intron variant	KCNMA1
	rs110783886	−4.00	0.92	0.31	11	62811507	2.18 × 10−5	Intergenic	NA
	rs41663416	−1.64	0.38	0.30	11	55575538	4.21 × 10−5	Intron variant	CTNNA2
	rs41627532	−1.53	0.37	0.29	13	29432282	5.25 × 10−5	Intergenic	NA
	rs110789957957	3.26	0.80	0.29	28	33061971	1.51 × 10−5	Intron variant	KCMA1