| Biological Samples |
|
A. spinulosporus NRRL 2395T
|
[37]; USDA ARS Culture Collection Database |
Strain # NRRL 2395T
|
|
A. nidulans A4 |
[35]; Fungal Genetics Stock Center |
Strain # A4 |
|
A. quadrilineatus NRRL 201T
|
This study; USDA ARS Culture Collection Database |
Strain # NRRL 201T
|
|
A. spinulosporus 4060 |
[28]; Laboratory of Dr. Donald Sheppard, McGill University |
Strain # 4060 |
|
A. latus NRRL 200T
|
This study; USDA ARS Culture Collection Database |
Strain # NRRL 200T
|
|
A. latus MM151978
|
This study; Laboratory of Dr. Donald Sheppard, McGill University |
Strain # MM151978
|
|
A. latus NIH |
This study; Clinical Laboratory of Dr. Katrien Lagrou, Department of Microbiology, Immunology and Transplantation, KU Leuven |
Strain # NIH |
|
A. latus ASFU1710 |
This study; Clinical Laboratory of Dr. Katrien Lagrou, Department of Microbiology, Immunology and Transplantation, KU Leuven |
Strain # ASFU1710 |
|
A. latus ASFU1908 |
This study |
|
|
A. latus ASFU2033 |
This study; Clinical Laboratory of Dr. Katrien Lagrou, Department of Microbiology, Immunology and Transplantation, KU Leuven |
Strain # ASFU2033 |
|
A. latus MO46149 |
This study; Clinical Laboratory of Dr. Catarina Lameiras, Department of Microbiology, Portuguese Oncology Institute of Porto |
Strain # MO46149 |
| Macrophages |
This study |
N/A |
| Neutrophils |
This study |
N/A |
| Human polymorphonuclear cells |
This study |
N/A |
| Human blood samples |
This study |
N/A |
| Chemicals, Peptides, and Recombinant Proteins |
| Caspofungin |
Sigma-Aldrich |
Cat#SML0425 |
| Amphotericin B |
Sigma-Aldrich |
Cat#A2942 |
| Itraconazole |
Sigma-Aldrich |
Cat#I6657 |
| Voriconazole |
Sigma-Aldrich |
Cat#PZ0005 |
| Posaconazole |
Sigma-Aldrich |
Cat#P-103 |
| Menadione |
Sigma-Aldrich |
Cat#M5625 |
| Hydrogen peroxide |
Sigma-Aldrich |
Cat#H3410 |
| Paraquat |
Sigma-Aldrich |
Cat#36541 |
| Bathophenanthrolinedisulfonic acid (4,7-diphenyl-1,10-phenanthrolinedisulfonic acid [BPS]) |
Sigma-Aldrich |
Cat#B1375 |
| 3-(2-pyridyl)-5,6-bis(4-phenylsulfonic acid)-1,2,4-triazine (ferrozine) |
Sigma-Aldrich |
Cat#P9762 |
| XTT (2,3-bis(2-methoxy-4-nitro-5-sulfophenyl)2H-tetrazolium- 5-carboxanilide sodium salt]) |
Sigma-Aldrich |
Cat#X4626 |
| MTT |
Sigma-Aldrich |
Cat#298-93-1 |
| PMA (phorbol 12-myristate 13-acetate) |
Sigma-Aldrich |
Cat#16561-29-8 |
| LIVE/DEAD™ |
Invitrogen |
Cat#R37601
|
| SYTOX™ Green Nucleic Acid Stain |
Invitrogen |
Cat#S7020 |
| Percoll |
GE Healthcare |
Cat#17-5445-02 |
| Proteinase K |
Sigma-Aldrich |
Cat#39450-01-6 |
| SYBR Green 10,000x |
Thermo Fisher Scientific Inc. |
Cat#S7567 |
| Triton® X-100 |
Sigma-Aldrich |
Cat#9002-93-1 |
| Deposited Data |
| Raw reads used for genomics; See Table S3
|
This study |
N/A |
| Genome assemblies; See Table S3
|
This study |
N/A |
| Predicted gene boundaries |
This study |
figshare: 10.6084/m9.figshare.8114114 |
| Phenotypic measurements |
This study |
figshare: 10.6084/m9.figshare.8114114 |
| FACS data |
This study |
figshare: 10.6084/m9.figshare.8114114 |
| Phylogenetic and phylogenomic data matrices |
This study |
figshare: 10.6084/m9.figshare.8114114 |
| Parent of origin analysis |
This study |
figshare: 10.6084/m9.figshare.8114114 |
| Homeologs per hybrid isolates |
This study |
figshare: 10.6084/m9.figshare.8114114 |
| Biosynthetic gene cluster predictions |
This study |
figshare: 10.6084/m9.figshare.8114114 |
| Experimental Models: Organisms/Strains |
| The greater wax moth (Galleria mellonella) |
Goldman lab |
N/A |
| Software and Algorithms |
| In Silico Whole Genome Sequencer and Analyzer (iWGS), version 1.1 |
[68] |
https://github.com/zhouxiaofan1983/iWGS |
| AUGUSTUS, version 3.3 |
[73] |
http://bioinf.uni-greifswald.de/augustus/ |
| Blast+, version 2.3.0 |
[107] |
https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+ |
| PAML, version 4.9 |
[80] |
http://abacus.gene.ucl.ac.uk/software/paml.html |
| Mafft, version 7.402 |
[77] |
https://mafft.cbrcjp/alignment/software/ |
| trimAl, version 1.2rev59 |
[83] |
http://trimal.cgenomics.org/downloads |
| RAxML, version 8.2.11 |
[84] |
https://cme.h-its.org/exelixis/web/software/raxml/ |
| IQTREE, version 1.6.1 |
[87] |
http://www.iqtree.org |
| Control-FREEC, version 9.1 |
[93] |
https://github.com/BoevaLab/FREEC |
