Table 2.
Sequence type, identification, phylogenetic group and previously reported sources of ESBL+ E. coli.
| Sequence Type |
Frequency (No. of Isolates) |
Identification Method 1 |
Phylogenetic Group |
Reported Source 2 |
|---|---|---|---|---|
| 2 | 5 | PUBMLST | B2 | human/domesticated animal |
| 4 | 1 | PUBMLST | D | human/food |
| 5 | 1 | PUBMLST | D | human |
| 8 | 11 | PUBMLST | D | domesticated animal |
| 21 | 1 | PUBMLST | D | humans/livestock |
| 87 | 1 | PUBMLST | D | primate |
| 132 | 2 | PUBMLST | B2 | animal |
| 244 | 1 | PUBMLST | D | human |
| 316 | 2 | PUBMLST | D | human/fish/poultry/livestock/environment |
| 357 | 1 | PUBMLST | D | human/poultry |
| 398 | 1 | PUBMLST | D | human/livestock/environment |
| 399 | 1 | PUBMLST | D | human/fish/poultry/livestock/environment |
| 511 | 2 | PUBMLST | D | human |
| 535 | 1 | PUBMLST | D | human |
| 537 | 1 | PUBMLST | D | human/livestock |
| 551 | 1 | PUBMLST | D | human |
| 569 | 2 | PUBMLST | B2 | human/environment/poultry |
| 573 | 1 | PUBMLST | D | human |
| 638 | 2 | PUBMLST | B2 | human |
| 647 | 1 | PUBMLST | D | human/livestock |
| 661 | 2 | PUBMLST | D | human/environment/livestock |
| 681 | 1 | PUBMLST | A | human |
| 740 | 1 | PUBMLST | D | human |
| 756 | 1 | PUBMLST | B2 | animal |
| 767 | 1 | PUBMLST | B2 | human/livestock |
| 809 | 1 | PUBMLST | D | human |
1 Sequence type was identified using the Pasteur method for multi-locus sequence typing (PUBMLST). 2 Source noted in this column is as reported by investigators who had submitted the corresponding STs to Enterobase.