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. 2020 Jun 5;12(11):10087–10098. doi: 10.18632/aging.103415

Table 2B. Common exon variants in the TMPRSS2 gene in different populations.

Variant ID Consequence A1/N alleles ITA Freq ITA A1/N alleles EUR Freq EUR A1/N alleles EAS Freq EAS ITA Vs EUR ITA Vs EAS EUR Vs EAS
rs2298659 p.Gly259Gly 1388/7968 0.174 28744/122880 0.234 5179/19478 0.266 P<2.2e-16 P<2.2e-16 P<2.2e-16
rs17854725 p.Ile256Ile 4131/7968 0.518 67712/122814 0.551 2544/19604 0.130 P=1.16e-08 P<2.2e-16 P<2.2e-16
rs12329760 p.Val160Met 1387/7968 0.174 29831/128604 0.232 7651/19934 0.384 P<2.2e-16 P<2.2e-16 P<2.2e-16
rs3787950 p.Thr75Thr 889/7968 0.112 9864/127666 0.077 2905/19600 0.148 P<2.2e-16 P=1.39e-15 P<2.2e-16

Total allele counts, carrier allele counts, and carrier frequencies are shown; only variants with MAF more than 5% were considered.

P values are presented as non-corrected; the number of statistical comparisons performed in Tables 1A, 1B, 2A, and 2B is collectively of 24, thus lowering the threshold for significance at P=0.0021 (Bonferroni threshold). Significant P values are indicated in bold.

A1: alleles carrying variants; Freq A1: frequency of A1 allele; ITA: Italian population; EUR: European population; EAS: East Asian population.