Table 2. Oligonucleotides used to generate the Mlh3-/-, Pms1-/- and Pms2-/- mESCs.
Name | Oligo sequence (5' to 3') |
---|---|
Mlh3_gRNA-F | CACCGTTCTTCAACACACTGGCCCA |
Mlh3_gRNA-R | AAACTGGGCCAGTGTGTTGAAGAA |
Mlh3_ssODN | TCTATCAGATGACGTAAAAACCAAGTTGCGTTCCGGTTTAGCCATAAGCTTCTAGGGCTAGCGTGATGAAGAACTTACCCTTAACAGTATTGATGCTGAAGCAACATGTGTGGCCA |
Pms1_gRNA-F | CACCGCAGAGTTCCAGATCACAGGA |
Pms1_gRNA-R | AAACTCCTGTGATCTGGAACTCTG |
Pms1_ssODN | TTCCATGTTGCCCATGACAGCAGTTCCCAGAACCGACATTAGAGGGATCCTAAGATCAGGAACACTGCTTTACTGCCAAATAACTGCCTAGGGAGAAGAAAACATAGATGTGTTGTAGCACA |
Pms2-gRNA1-gibson | GAAAGGACGAAACACCGAGAGTTTGCCGACCTCACGCGTTTTAGAGCTAGAAATAGC |
Pms2-gRNA2-gibson | TTTCTAGCTCTAAAACCGTGGTTTATGCTTTACTACGGTGTTTCGTCCTTT |
Pms2-ssODN | CTTTCTACTCTCTTTCAGCTCTGAAACATCACACATCTAAGATTCAAGAGTTTGCCGTGCTTTACTACTGAAGTATCTTGACTCCGAGCTTTAATTCTCT |
scaffold-U6prom | GTTTTAGAGCTAGAAATAGCAAGTTAAAATAAGGCTAGTCCGTTATCAACTTGAAAAAGTGGCACCGAGTCGGTGCTTTTTTTCCGATCATGGGTCGAACGTTACGCAGAGGGCCTATTTCCCATGATTCCTTCATATTTGCATATACGATACAAGGCTGTTAGAGAGATAATTGGAATTAATTTGACTGTAAACACAAAGATATTAGTACAAAATACGTGACGTAGAAAGTAATAATTTCTTGGGTAGTTTGCAGTTTTAAAATTATGTTTTAAAATGGACTATCATATGCTTACCGTAACTTGAAAGTATTTCGATTTCTTGGCTTTATATATCTTGTGGAAAGGACGAAACACCG |
Note: the underlined bases indicate the gRNA sequences and the bases in bold indicate the mutations introduced in the ssODNs to generate stop codons in all 3 reading frames.