| ATG—autophagy-related gene |
| c-CBL—casitas B-lineage lymphoma |
| CSN—COP9 (constitutive photomorphogenesis 9) signalosome |
| CTLH—C-terminal to LisH complex |
| DCM—dilated cardiomyopathy |
| DCN1—defective in cullin neddylation 1 protein |
| DCNLs—DCN1-like proteins |
| DSM—familial dilated cardiomyopathy |
| DUBs—deubiquitinases |
| EDMD—Emery-Dreifuss muscular dystrophy |
| EFP—estrogen-responsive finger protein |
| EMT—epithelial-to-mesenchymal transition |
| GABARAP—gamma-aminobutyric acid receptor-associated protein |
| GABARAPL1—gamma-aminobutyric acid receptor-associated protein like 1 |
| HDFs—human dermal fibroblasts |
| HECT—homologous to the E6AP carboxyl terminus |
| HGPS—Hutchinson–Gilford progeria syndrome |
| IAP—inhibitor of apoptosis |
| IF—intermediate filaments |
| INM—inner nuclear membrane |
| ISG15—interferon stimulated gene product 15 |
| KAP1—Krüppel-associated box (KRAB)-associated protein 1 |
| LAP2α—lamina-associated polypeptide 2α |
| LC3—microtubule-associated protein a light chain |
| MDM2—murine double minute 2 |
| NAE—NEDD8 activating enzyme |
| NE—nuclear envelope |
| NEDD8—neural precursor cell expressed, developmentally down-regulated 8 |
| NEDP1—NEDD8-specific protease 1 (also known as DEN1) |
| NLs—nuclear lamins |
| NLS—nuclear localization signal |
| PE—phosphatidylethanolamine |
| PIAS—protein inhibitor of activated STAT |
| PML—promyelocytic leukemia protein |
| pRb—retinoblastoma protein |
| PTMs—posttranslational modifications |
| RBR—RING-in-between-RING |
| RBX1/2—RING-box proteins 1 and 2 |
| RING—really interesting new gene |
| Rmnd5a—required for meiotic nuclear division 5a |
| RNF—ring finger protein |
| ROC1—regulators of cullins 1 |
| SCF—Skp1–Cullin–F-box proteins |
| SENP—Sentrin specific proteases |
| SIM—SUMO-interacting motif |
| SMURF2—Smad ubiquitin regulatory factor 2 |
| SUMO—small ubiquitin-related modifier |
| TRIM—tripartite motif-containing protein |
| UB—ubiquitin |
| UBA—ubiquitin-activating enzyme |
| UBC—ubiquitin-conjugating enzyme |
| UBL—ubiquitin-like |
| UFC1—ubiquitin-fold modifier conjugating enzyme 1 |
| UFL1—UFM1 specific ligase 1 |
| UFM1—ubiquitin-fold modifier 1 |
| ULMs—ubiquitin-like modifiers |
| ULPs—ubiquitin-like peptidases |
| URM1—ubiquitin-related modifier 1 |
| USP—ubiquitin specific peptidase |