Table 2.

Summary statistics of the top two quantitative trait loci (QTL) associated single-nucleotide polymorphisms (SNPs) per-population that passed the genome-wide or chromosome-wide significance threshold.

Population	chr	Position	p-Value	maf	VP	Vg
SB-17	27	10,393,267	1.63 × 10−14	0.32	7.69	15.62
SB-17	27	10,348,407	4.51 × 10−15	0.48	7.71	15.68
SB-18	27	10,052,153	2.18 × 10−13	0.17	7.97	13.55
SB-18	27	10,348,407	5.64 × 10−13	0.50	8.30	14.11
SF-17	27	10,052,153	1.51 × 10−35	0.39	15.70	38.80
SF-17	27	10,413,738	3.65 × 10−21	0.37	9.17	22.65
Meta-analysis	27	10,052,153	2.06 × 10−48	0.27	9.57	21.91
Meta-analysis	27	10,348,407	3.91 × 10−23	0.49	4.49	10.29
SB-17	12	61,702,164	9.65 × 10−07	0.12	3.03	6.16
SB-17	12	61,701,806	5.74 × 10−06	0.12	2.64	5.36
SF-17	12	61,626,398	1.38 × 10−06	0.22	2.71	6.70
SF-17	12	61,694,062	2.97 × 10−06	0.39	2.87	7.09
Meta-analysis	12	61,626,398	2.47 × 10−09	0.41	2.34	5.36
Meta-analysis	12	61,443,087	1.20 × 10−06	0.20	1.17	2.68

chr: chromosome; maf: minor allele frequency; V_P: phenotypic and V_g: genetic variances explained by the mark.