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. 2020 Jun 12;9(6):465. doi: 10.3390/pathogens9060465

Table 1.

Overview of the sequencing reads.

Samples Q30 1 Raw Reads Filtered Reads Mapped Reads
PBS 0.984 6,994,764 6,965,344 (99.6%) 4,909,354 (70.5%)
PEP 0.983 7,348,062 7,309,726 (99.5%) 5,090,978 (69.6%)
12 h 0.985 8,308,408 8,271,920 (99.6%) 6,103,570 (73.8%)
24 h 0.982 8,315,180 8,274,926 (99.5%) 6,085,915 (73.5%)

1 Q30: Phred Quality Score; probability of incorrect base call: 1 in 1000. PBS: protoscoleces washed with PBS; PEP: protoscoleces washed with PBS + treatment with pepsin; 12 h: protoscoleces subjected to PBS + PEP + biphasic medium for 12 h; 24 h: protoscoleces subjected to PBS + PEP + biphasic medium for 24 h.