Table 1.
Marker genes selected for identification of the four new CNS categories of tumors
| This study | Sturm et al., 2016 | ||||
|---|---|---|---|---|---|
| Group | Probe | Gene | Top position significance |
Fold | Top position significance |
| HGNET-BCOR | 219433_at | BCOR | Group marker | Group marker | |
| HGNET-BCOR | 215264_at | EMX1 | 1 | 65.5 | 122 |
| HGNET-BCOR | 230311_s_at | PRDM6 | 3 | 13.2 | 47 |
| HGNET-BCOR | 230700_at | RTN4RL1 | 22 | 12.2 | 40 |
| HGNET-BCOR | 244467_at | SHISA8 | 29 | 29.2 | 12 |
| HGNET-BCOR | 214614_at | MNX1 | 37 | 27.9 | 60 |
| HGNET-BCOR | 203365_s_at | MMP15 | 59 | 10.1 | 13 |
| HGNET-MN1 | 1553842_at | BEND2 | Group marker | Group marker | |
| HGNET-MN1 | 223347_at | MUM1 | 2 | 16 | 8 |
| HGNET-MN1 | 207570_at | SHOX | 3 | 362 | 7 |
| HGNET-MN1 | 235548_at | APCDD1L | 5 | 185 | 18 |
| HGNET-MN1 | 219140_s_at | RBP4 | 6 | 158 | 51 |
| HGNET-MN1 | 219729_at | PRRX2 | 10 | 38.6 | 112 |
| HGNET-MN1 | 227194_at | FAM3B | 15 | 320 | 13 |
| HGNET-MN1 | 201135_at | ECHS1 | – | – | 9 |
| NB-FOXR2 | 1569669_at | FOXR2 | Group marker | Group marker | |
| NB-FOXR2 | 239499_at | DNAH2 | 45 | 34.5 | 7 |
| NB-FOXR2 | 209842_at | SOX10 | 74 | 95.9 | 23 |
| NB-FOXR2 | 222095_s_at | FAM163A | 93 | 19.8 | 24 |
| EFT-CIC | 212338_at | MYO1D | 11 | 31.7 | 8 |
| EFT-CIC | 209616_s_at | CES1 | 17 | 197 | 43 |
| EFT-CIC | 235849_at | SCARA5 | 44 | 167 | 45 |
| EFT-CIC | 215161_at | CAMK1G | 62 | 130 | 1 |
| EFT-CIC | 235238_at | SHC4 | 80 | 37.5 | 6 |
| EFT-CIC | 1554576_a_at | ETV4 | – | – | 91 |